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berkeley_reactor_200306_planktonic_scaffold_255293_53

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 53165..56476

Top 3 Functional Annotations

Value Algorithm Source
PAS domain S-box n=1 Tax=Chthonomonas calidirosea T49 RepID=S0ETM6_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 36.3
  • Coverage: 721.0
  • Bit_score: 404
  • Evalue 3.20e-109
PAS domain S-box similarity KEGG
DB: KEGG
  • Identity: 36.3
  • Coverage: 721.0
  • Bit_score: 404
  • Evalue 9.10e-110
PAS domain S-box {ECO:0000313|EMBL:CCW34875.1}; TaxID=1303518 species="Bacteria; Armatimonadetes; Chthonomonadetes; Chthonomonadales; Chthonomonadaceae; Chthonomonas.;" source="Chthonomonas calidirosea (strain DSM 23976 / ICMP 18418 / T49).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 36.3
  • Coverage: 721.0
  • Bit_score: 404
  • Evalue 4.50e-109

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Taxonomy

Chthonomonas calidirosea → Chthonomonas → Chthonomonadales → Chthonomonadetes → Armatimonadetes → Bacteria

Sequences

DNA sequence
Length: 3312
TTGAGCAAGACCAATCCCCCAGTCGTAATCACCTTTTTAAGGCTGACGGCCTTGACGCTGTTGTATGTCTTGGGAGCCATTTTTGGAAACAAAGTCACGTTGTTCTCCGGGGGATATTCATTGATCTGGCCGCCGGCCGGCATCGCCCTGGCGGGTATTCTTCTCTACGGCTACGGGTATTGGCCGGCGATCACCCTGGGCTCGCTGGTGTTCGCCTACATCAGCGGCGTCAAATTCGGTTTTTTCCTGGGATTCACGGCCGCCGGCAATGCGCTGGGCGCCGTCACCTGTGCCTACCTGATGCGCCGGTTTGTCAATTTCGACAATGCGCTCGGCCGGTCCCAGGATGCCGGCGCCTACCTGGTCTTCGGGTGCGGATTGGGCACCACGATCAACGCGGTTTGCAATGCCACCGGCTTGTTTTACGACGGCAAAATCGCCTGGGGCGACCTGTTCCAGAATATCGTGGCGTGGTGGGTGCCCAACGCGCTGGCGGTTCTGGTGATTGCTCCCGTCCTGCTGGTCTGGCTCACGCCGTCGCCGATGCGGTTCAATTTCTGGGCGGTCGTCGAGGGATTGCTCTGTGCGGCCGGGCTGGCGGGCGGCACGTTGATTGCCTTTGATACCTGGTATGTTTACGGCCTGGAAGGGTATCCGCTGGCCTATCTGCCCTATCCCTTTCTCGTCTGGAGCGCGCTGCGGTTTGGTTCGCGCGGAGCCGTGACCGGCACGCTGGTGGTGGCCGCCCTGGCGGTGTATTCGTTGGATAATAAACGCGGCCCGTTTTATACCGCGCACGAGGCGGACAGCCTGCGGCTGGTCGGAAGTTATGTCGCCATCGTGGCGGCGTCCAATCTCCTGCTGGCGGCGGCGGGCATGGAACGCCGCCGGGCGCTGGCCGAAATTCTTTCCAATGAAAAACGCCTCCGCCTGGTGGTGGGCGAGCAGCAGGACTTGATCTGCCGGTTCAACGACGCGGGCCGGATCACTTTCGTCAACCCCGCCTACTGCCGGTTCAACGCGAAGGCGGAAGAGGCATTGATCGGAACCAATTTCTTTGCCCACCTGGATGAACCGGAAGCCGCCCGGCTGCGGGAAAACCTGGCCGCCCTGCCCGATGAACGGCCCGTGTGCGTGTTTGACCGCCGTTCCGTGGCGGCCGATGGCCATCGGGAATGGCAGCAATACAACATCCGCCGGCTGGTGCGCGCGGAGGCAAACGAAAACGAATTCCAAGCCGTCATCCAGAACATTTCCGAGCGCAAGACCATGGAGCTGGAACTCCAGCACGCGAAATCCAAGCTGGAAAAAATCAACCTCGAACTCAAAATCACCGCCCAGGACGCGCGCGTCGCCGCTGAACGCGCCAACCGCGCCAACGCCGCCAAAAGCGAGTTTCTCGCGAACATGAGCCACGAGCTGCGCACGCCGTTGAGCGGCATGCTGGGGATGATTGAACTGCTGGCCCAGACGCGCCTGGATTCCCGCCAGCGGGAATTTGCCGAGGCCGCCACCGAAAGCGCCAACTCGCTGCTCCACGTCATCAACAACATCCTCGATTTCTCCAAGATCGAGTCGGGAAAAATGGCCATCGCCCGGGAGGCATTTTCACCGCGCAGCCTGGTGGACAGCGTGCTGGAAACCGCCTCCGGCCGGGAGCCGGAAAAGAAGATCAACCTGGCGGCCATCGTCCGCCGCGACGTGCCGCACCGGCTGCTCGGCGATCCGGCCCGGATCCGCCAGGTGTTGCTCAACCTCGTGGACAACGGCATCAAGTTTGCCACGCAGGGCGAGGTGGTGGTCCGCATTTATCCCCTGATCCACACGCCGGAAAATTTGCGGCTCCGCGTCGAAGTCTCCGACACCGGCATCGGCCTCTCCGAAGACCAGATCAAACTGCTGTTCCAGCCGTTCATGCAGGTGGACACATCCTCCTCGCGACGGTTCGGCGGCACCGGGTTGGGGCTGGCCATCTCCCAGAAAATCATCGAGCTCATGGACGGCACCATCGGAGTATTCAGCACCCTGGGCAGCGGCTCCACCTTCTGGTTCGAGATTCCGCTGGGCATCCCCGAACAGCCGCCCCTGGACCGCGGGTATCCCGGGCTGGTCTTTGCCCAGGTGTTGATTGCCGCTCCGAACACGAATTTGCGCGAATCCCTCGTCGAACGCCTGCACGGCTGGGGCATGGACTGCCGGGAAATTTCCACCGTGGACGAGCTGTTCCACACCGTCCAGCACGAGCTCCGCGCCGCCGTCATGCCGCTGATGTTGTGCGATGACGAAATGCTGGCGCTGGGCGGAGACAAACTCCGGCGGCAGTTGGTCGGCAAACTCCACCAGATAAAGTGCATTCTGCTGGCCGGCCCCACCGCCACGCTCACCGGCGAGGAAGGTGATTTAAACCTCTTCAACACGGTCCTGCTCAAACCCGTTCGCGAGCAGCCGTTGTTTGAAGCGCTGGTGGCCGCCGTCGCCGGCCAGAAACCCGAACTCACCAGTCCCCTGCGCGTGCCCGGCGACACCCGCGACACCCAGATGATCCGCCGGGAAGCCGCCGCCGCCAAACGCACGCCCGTGGCCCGGCTGCGCATCCTCGCCGCCGAGGATCATCCCTTCAATCGCCGCCTCTGCCAGATGATGCTGGACACCTTCGGCGCCAAGGCCGACTGGACGGTCAACGGACGCGAAGCCGTGGAAAAATTCAGTCCCGATGCCTACGACGTCATTCTCATGGACTGCAACATGCCCGAAATGGACGGCCACGAAGCCACCGCCGCCATCCGGCATATCGAGATGGAAAAGAAAGCCCAGCAGCCCGTTCACATCATCGCCATCACCGCCAACGCCCTCGTGGGCGAGCGCGAGCGCTGCCTCGCCGCCGGCATGAACAATTACATCTCCAAGCCATTCACCTCCCAGCAATTATACCACGCGCTCTTGGAAGCCGCGCCCGCCCGGGCCGCCGCCGCCGGGGATTTTGACCCGGATAAGCTGGATCAACTCGCCAAGGAACTCAGCCGGCCGGCCGTCACCGAAATGGTCGGCGATTTTCTCAACGAACTGCCCGACCGGCTGACCGAAATCCACCGCCTGCACCAGTTTCAACGCTGGCCGGACCTCAAACGCGCCGCGCATTCCCTCAAAGGCCTGTTCACCGTGTTTGGTTTCGAATCCTTGTCCGAAAGCTTTCATGCCCTCGAGGAAGCCGCCGCCGTGGAAAACCCGCAACGCGTCGGCTTCGCCCTGGTCGGACTGGATGCGCAATCCGAAACCGCCGTGCTGCAACTCAAGGAATGGTTGCAGGATTAA
PROTEIN sequence
Length: 1104
LSKTNPPVVITFLRLTALTLLYVLGAIFGNKVTLFSGGYSLIWPPAGIALAGILLYGYGYWPAITLGSLVFAYISGVKFGFFLGFTAAGNALGAVTCAYLMRRFVNFDNALGRSQDAGAYLVFGCGLGTTINAVCNATGLFYDGKIAWGDLFQNIVAWWVPNALAVLVIAPVLLVWLTPSPMRFNFWAVVEGLLCAAGLAGGTLIAFDTWYVYGLEGYPLAYLPYPFLVWSALRFGSRGAVTGTLVVAALAVYSLDNKRGPFYTAHEADSLRLVGSYVAIVAASNLLLAAAGMERRRALAEILSNEKRLRLVVGEQQDLICRFNDAGRITFVNPAYCRFNAKAEEALIGTNFFAHLDEPEAARLRENLAALPDERPVCVFDRRSVAADGHREWQQYNIRRLVRAEANENEFQAVIQNISERKTMELELQHAKSKLEKINLELKITAQDARVAAERANRANAAKSEFLANMSHELRTPLSGMLGMIELLAQTRLDSRQREFAEAATESANSLLHVINNILDFSKIESGKMAIAREAFSPRSLVDSVLETASGREPEKKINLAAIVRRDVPHRLLGDPARIRQVLLNLVDNGIKFATQGEVVVRIYPLIHTPENLRLRVEVSDTGIGLSEDQIKLLFQPFMQVDTSSSRRFGGTGLGLAISQKIIELMDGTIGVFSTLGSGSTFWFEIPLGIPEQPPLDRGYPGLVFAQVLIAAPNTNLRESLVERLHGWGMDCREISTVDELFHTVQHELRAAVMPLMLCDDEMLALGGDKLRRQLVGKLHQIKCILLAGPTATLTGEEGDLNLFNTVLLKPVREQPLFEALVAAVAGQKPELTSPLRVPGDTRDTQMIRREAAAAKRTPVARLRILAAEDHPFNRRLCQMMLDTFGAKADWTVNGREAVEKFSPDAYDVILMDCNMPEMDGHEATAAIRHIEMEKKAQQPVHIIAITANALVGERERCLAAGMNNYISKPFTSQQLYHALLEAAPARAAAAGDFDPDKLDQLAKELSRPAVTEMVGDFLNELPDRLTEIHRLHQFQRWPDLKRAAHSLKGLFTVFGFESLSESFHALEEAAAVENPQRVGFALVGLDAQSETAVLQLKEWLQD*