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berkeley_reactor_200306_planktonic_scaffold_295472_52

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(60583..61164)

Top 3 Functional Annotations

Value Algorithm Source
Crossover junction endodeoxyribonuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106335}; EC=3.1.22.4 {ECO:0000256|HAMAP-Rule:MF_00034, ECO:0000256|SAAS:SAAS00106388};; Holliday junction nuclease RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; Holliday junction resolvase RuvC {ECO:0000256|HAMAP-Rule:MF_00034}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 64.0
  • Coverage: 197.0
  • Bit_score: 249
  • Evalue 2.50e-63
crossover junction endodeoxyribonuclease RuvC (EC:3.1.22.4) similarity KEGG
DB: KEGG
  • Identity: 48.7
  • Coverage: 152.0
  • Bit_score: 128
  • Evalue 1.30e-27
Crossover junction endodeoxyribonuclease RuvC n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XLI6_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 64.0
  • Coverage: 197.0
  • Bit_score: 249
  • Evalue 1.80e-63

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 582
ATGCAGGAACGGTTGAACGGCAAAAAAAGCCGTCCGGCGTCTTCTGCTCCGTCCCCGGTCACCCGCCGCCCGCCGCCGGCGTCACAGATTATTCTGGGCGTTGACCCGTCGCTGCGCGGCACGGGTTTCGGCGTGATTCAGGTGGGTGGCGCGCAAGCGATTGCCCTGGCGCACGGGACCATTGCCTGTTCCAAAGACTGGGAACGCTCCCGTTGCCTGGCCAAAATTTCACAGACTTTGCGCGAGGTTTTGAACCATCACCGGCCGCAGGTTTGCGTCGTGGAAGGATTGTTCTTCGCGCAAAACCTGAAAACCGCCATTGTCATGGGCGAGGCGCGCGGCGCGGCGATGGCGGCCATGGCGGAGGCCGGGCTCGATATTTACGAAATCGCCACGCGCAAGGTGAAACAGGCCATGGTCGGCTACGGCGCGGCGCAAAAGCTGGCGGTGGCCAAGATGGTGCAGCGCCTGTTGAACCTTGCGGAATTGCCCGCGCCCGATGCCGCCGACGCGCTGGCGCTGGCCCTGGCGCACGCGCAGGAACAAAGCCGGTTCAGCTTGAAGTCGCCAAAAAAAATATGA
PROTEIN sequence
Length: 194
MQERLNGKKSRPASSAPSPVTRRPPPASQIILGVDPSLRGTGFGVIQVGGAQAIALAHGTIACSKDWERSRCLAKISQTLREVLNHHRPQVCVVEGLFFAQNLKTAIVMGEARGAAMAAMAEAGLDIYEIATRKVKQAMVGYGAAQKLAVAKMVQRLLNLAELPAPDAADALALALAHAQEQSRFSLKSPKKI*