ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_302219_46

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 51521..54931

Top 3 Functional Annotations

Value Algorithm Source
alpha-L-fucosidase (EC:3.2.1.51) similarity KEGG
DB: KEGG
  • Identity: 47.6
  • Coverage: 584.0
  • Bit_score: 548
  • Evalue 3.10e-153
Alpha-L-fucosidase id=3838017 bin=GWF2_Lentisphaerae_50_93 species=Fibrella aestuarina genus=Fibrella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S similarity UNIREF
DB: UNIREF100
  • Identity: 49.4
  • Coverage: 575.0
  • Bit_score: 573
  • Evalue 2.40e-160
Tax=GWF2_Lentisphaerae_50_93_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 49.4
  • Coverage: 575.0
  • Bit_score: 573
  • Evalue 3.40e-160

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWF2_Lentisphaerae_50_93_curated → Lentisphaerae → Bacteria

Sequences

DNA sequence
Length: 3411
ATGAAGTTCCATCTCCGCCAACTCTATCTGCCGGTGGCCGCGCTGTTTTCTGCCGCCTCCCTTTCCCTTTACGCCTACACGCTCCCGGACCTGCCGCCCATGCCGCTGGTCAAACCGGCTCCCGCCAATTCCGTGCCGATGGGCGATCCGGCAAAATTTCCCGAGGTGAAAATGAATTTTCCCATTGAAACCAACGGGCCGTTTCAGCCGACCTGGACCTCCATTGCGGCGAATGTTCCCGGCAACGGCACGCCGGCGTGGCTGCGGCAGGCCAAGTTCGGCATCTGGTTCCATTTCGGCCCCCAATCGGAACTGGCCAGCGGCGACTGGTCGGCCCAGCACATGTATCAGCAAGGTTCGACGGCCTACAATAATCATCTGGCCGAATTCGGCTATCCGGCCACGAACGGTTACAAGGACGTGATTCGCGCGTGGAATCCGACGAACTACGATCCCGCCGCGCTGGCGCAGTTGTTTTACAATGCCGGTGCGCGCTTCGTGCTCGTGCAAGGCGTGCATCACGACAACTTCGACAACTGGAACTCGCGCTACAATCTGTGGAACGAAATGAACTTCGGTCCCAAGCGCGACACGATGGCCGAATGGACCAACGCGCTCCGCCGCCTGGGCATGCACTTCGGCGTGGCGTTTCATCACGAATACAGCTGGTGGTTCACGCAGCCGGATTTTTTGAGCGACAGTTCCGGGCCGTTCGCCGGCGTGCCTTATGACGCCGTCACCGCCACCAACAGCGCCGGCAACTGGTGGCAGAACTACGACATTCGCCGGCTCTACAATCAGGATCTGCACAAATACCAGGGCATCAGCACGCCCACGCAGGGCTATTGGAATCCGGGCCAGGGCATTTTCACCAACGACCTGGATTATTGCCACTGGTATGCCACGCAATGGGCGTTGCGCATTTTGGACGTGATTGAAAACTACGCTCCCGATTTCATCTACACCGACGGCAATTCCTCCCAGCCGTTCAGCGGTTACGCCACCGGCACCGGTTACAAGTGCGACGCCATGCAGCGCGTCATCGCCCATTACTACAACCGCACCCTCGAACGCGACGGCCAGTTGGACACGCTGGCGGTGGTGAAATTCCACAACGGCGACCGCATCGGCACGACCTTTGAAGGCGGCTATTCTTCGACGATCAAGGAAGACCAGCCGTGGTTCGCCGAAATGGCCATTGGGGACTGGTTTTGGCGGCCGGGCATTTCCTACGATTCCGGCGGCACGATTGTCCAGCGCCTGCTCGAAGCGGTTTCCCGCGATGGCGCGATGATGGTCAATATCCCCAACCGCCCCGATGGCTCGCTGGACTCCGGCGCGACCAACATGCTGCTCGATGTCGGTCAGTGGATGGCGGTCAACGGCGAAGGCATTTACGGCAGCCGCGCCTGGGTGAAGCCGACGGATGGCAATTTCCGGTTCACCGTCGGCACCAACGGATTTCTCTATGCCTACCATCTCGGCCTTCCCGCCGGCGGCACGCAACTGACCATTCCCTCGCTCGCCAGCAGTTCAAGCAATCTGAAAGCGCCGGTTGGCTCCGTGTCGCTGCTGGGCAGTGCGGCGGTGTTGAACTGGTCGCAAACATCCACCGGCTTGGTCGTCACCCTGCCGGCCAGCCTGCCCAGCCTGCCGCCGGGCACGGCCCTTGGTTTGAAAATCGGACCGGCCACCGCCATTGGCAGCGCCCCGCCGGCCAATGTTATCGCCCTGCCGGGAACCAACCAGATCAACCTCGCGTGGTATAGTCCTGCGGCGAACTCGCGGTTCACGGTGAAACGTTCCGCCGCCGGCGGCAGTGCTTACACGACGATCGCGACCAATCTGCCGGAGATGGAATTTGCGGACACGAATGTGTCGCCGGGCACGCTGTATTATTACACCGTCTCCGCGGTGGATGCGGCGGGCGAATCGGTTGATTCTCCGCCGGCTTCCGCCGCGCTGATTGCCCCCCCGTCAAATCACTGGCTCACCGAAGATGTCGGGGCGGTGGGCGCGATGGGTTCCTTCGGCCAGACCAACGGCGTTTTCACCATCCGCGGCTCCGGCGCGGACATCTGGTATTCGGCGGATGCATTTCGCTACGTCTTTCAGACGCTGTCCGGCGATTGTTCCATCACGGCGCGCGTGTTGAACCTGGACAACACCGCCGGCTGGGCCAAGGCCGGTTTGATGATTCGCGAATCGCTTGATCCGGGGGCGAAATACGTCGCCAATTTTCTGTCGCCCGCGAATGGAGCGGCATTGCAGGACCGCTCCAGCACGGGCGGTTCCGCCGCCGGCGTCAGCAACCCGACCGGCTTGGCCGCGCCGTATTGGCTGCGGCTGGTGCGCGCCGGCGACACGTTCACGGCCTACGCTTCGCCGGATGGCGTCAACTGGACTTCGGTGGGCACGACCACGGTGGCGATGAATGTCGCGGTTTATATCGGGTTGGAAGTTTGCAGCGTCAATGACGGCACGCTGTGCAAGGCCCAGTTTGACCACGTCTCGTTTTCCGCGTCGTCGGTGGTTTCTTCCTCGCCGCTGCCGCCGCTGATCCATCGCTGGAGCTTCAACGAAACCAGCGGCACGATCGCCCACGATTCGGTTGCCGGGGCGGACGGCACGCTGGTGGGCGCCGCCGCATTTGATGGCAACGGCCAGGTGACGCTGGACGGCACGAGCGGAACGTATGTGAGCCTGCCGGGAAATTTGCTCGCCGGCTTGACGAATGTGACAATTGAAGCATGGTTGACCAACGCCGTTTCGCCCGACAACGTGCCGTTGTTTTCCTTTGATAACGGATTGCAGGACGGCGTGGGCGGCGGCTATTTGCGTTTCGTTTTGCATGACAGTGGCAACGGGCGCAATTTTTTGGAACTGGCCAGCAATGGCGGCAGCCCGAAAGTCACCGCCAACCCGGGATTGGGCGGACAATCTGTGCATGTGGTTTGTGTTTACAATCCCGCCGGCGGCGTGGCGCTCATTTATACCAACGGCGTGTTGGCGGCCAGTCAGGCGGTTTCAACCCCACTGACCACCGTCAGCACCAATGCCGCCGCTCTGGGCCGTTCGCCTTGGGGCGGCGATCCGTGGCTCAACGGCGCGATTGATGAATTGCGCATTTATGCCGGGCAGTTGTCGCCGTCCGACATCGCCGCGGCTCAGTCCGTTGGTCCTGATGTTCTCCTGACCACCAACGTTGCGTTGAACGTGTCCCAGGGCAGCGGCGCGTTGACCTTGAGCTGGCCGATGGCGGGTTCGGGCTTTGTCGTGGAATCCAGTCCCACCCTCGGGCCTGATGCAGATTGGACCCTGGTGAATGCTCCGCTGGCCGTCCAGGGGAACGACAATGAGGTCACGATGGCGGCCACCAGCAAAGCTATGTTTTTTCGGCTTCGTAGATAA
PROTEIN sequence
Length: 1137
MKFHLRQLYLPVAALFSAASLSLYAYTLPDLPPMPLVKPAPANSVPMGDPAKFPEVKMNFPIETNGPFQPTWTSIAANVPGNGTPAWLRQAKFGIWFHFGPQSELASGDWSAQHMYQQGSTAYNNHLAEFGYPATNGYKDVIRAWNPTNYDPAALAQLFYNAGARFVLVQGVHHDNFDNWNSRYNLWNEMNFGPKRDTMAEWTNALRRLGMHFGVAFHHEYSWWFTQPDFLSDSSGPFAGVPYDAVTATNSAGNWWQNYDIRRLYNQDLHKYQGISTPTQGYWNPGQGIFTNDLDYCHWYATQWALRILDVIENYAPDFIYTDGNSSQPFSGYATGTGYKCDAMQRVIAHYYNRTLERDGQLDTLAVVKFHNGDRIGTTFEGGYSSTIKEDQPWFAEMAIGDWFWRPGISYDSGGTIVQRLLEAVSRDGAMMVNIPNRPDGSLDSGATNMLLDVGQWMAVNGEGIYGSRAWVKPTDGNFRFTVGTNGFLYAYHLGLPAGGTQLTIPSLASSSSNLKAPVGSVSLLGSAAVLNWSQTSTGLVVTLPASLPSLPPGTALGLKIGPATAIGSAPPANVIALPGTNQINLAWYSPAANSRFTVKRSAAGGSAYTTIATNLPEMEFADTNVSPGTLYYYTVSAVDAAGESVDSPPASAALIAPPSNHWLTEDVGAVGAMGSFGQTNGVFTIRGSGADIWYSADAFRYVFQTLSGDCSITARVLNLDNTAGWAKAGLMIRESLDPGAKYVANFLSPANGAALQDRSSTGGSAAGVSNPTGLAAPYWLRLVRAGDTFTAYASPDGVNWTSVGTTTVAMNVAVYIGLEVCSVNDGTLCKAQFDHVSFSASSVVSSSPLPPLIHRWSFNETSGTIAHDSVAGADGTLVGAAAFDGNGQVTLDGTSGTYVSLPGNLLAGLTNVTIEAWLTNAVSPDNVPLFSFDNGLQDGVGGGYLRFVLHDSGNGRNFLELASNGGSPKVTANPGLGGQSVHVVCVYNPAGGVALIYTNGVLAASQAVSTPLTTVSTNAAALGRSPWGGDPWLNGAIDELRIYAGQLSPSDIAAAQSVGPDVLLTTNVALNVSQGSGALTLSWPMAGSGFVVESSPTLGPDADWTLVNAPLAVQGNDNEVTMAATSKAMFFRLRR*