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berkeley_reactor_200306_planktonic_scaffold_302219

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Displaying items 31-47 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
berkeley_reactor_200306_planktonic_scaffold_302219_30
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26206..27297
DNA (1092bp) protein (364aa)
molybdate ABC transporter ATPase n=1 Tax=Schlesneria paludicola RepID=UPI00029AFF4C
Molybdenum ABC transporter ATPase {ECO:0000313|EMBL:KFA90526.1}; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter violaceus Cb vi76.;"
molybdate ABC transporter ATPase
berkeley_reactor_200306_planktonic_scaffold_302219_31
Fimbriimonas ginsengisoli, Fimbriimonas, Fimbriimonadales, Fimbriimonadia, Armatimonadetes, Bacteria

Not on your lists

comp(27339..29612)
DNA (2274bp) protein (758aa)
Alpha-1,2-mannosidase
Alpha-1,2-mannosidase {ECO:0000313|EMBL:AIE86527.1}; TaxID=661478 species="Bacteria; Armatimonadetes; Fimbriimonadia; Fimbriimonadales; Fimbriimonadaceae; Fimbriimonas.;" source="Fimbriimonas ginsengisoli Gsoil 348.;"
Putative alpha-1,2-mannosidase id=4426036 bin=GWC2_Ignavibacteria_56_12 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
berkeley_reactor_200306_planktonic_scaffold_302219_32
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

29905..32982
DNA (3078bp) protein (1026aa)
Histidine kinase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XB01_9BACT
Histidine kinase {ECO:0000313|EMBL:EEF63186.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
two component regulator, sensor protein
berkeley_reactor_200306_planktonic_scaffold_302219_33
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

33005..33637
DNA (633bp) protein (211aa)
Two component transcriptional regulator, LuxR family n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XB02_9BACT
Two component transcriptional regulator, LuxR family {ECO:0000313|EMBL:EEF63187.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
LuxR family transcriptional regulator
berkeley_reactor_200306_planktonic_scaffold_302219_34
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

33649..35919
DNA (2271bp) protein (757aa)
Glycoside hydrolase family 2 sugar binding n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XB03_9BACT
Glycoside hydrolase family 2 sugar binding {ECO:0000313|EMBL:EEF63188.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
Beta-galactosidase/beta-glucuronidase
berkeley_reactor_200306_planktonic_scaffold_302219_35
RLO_Verrucomicrobia_64_8, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

comp(36241..37143)
DNA (903bp) protein (301aa)
Transcriptional regulator, AraC family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D5Y6_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated
berkeley_reactor_200306_planktonic_scaffold_302219_36
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

37211..38320
DNA (1110bp) protein (370aa)
Pyridoxal 4-dehydrogenase id=4421326 bin=GWF2_Lentisphaerae_50_93 species=unknown genus=Rhodopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
oxidoreductase, aryl-alcohol dehydrogenase like protein
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
berkeley_reactor_200306_planktonic_scaffold_302219_37
RIFOXYB12_FULL_Lentisphaerae_65_16_curated, Lentisphaerae, Bacteria

Not on your lists

38324..39151
DNA (828bp) protein (276aa)
Amidohydrolase 2 id=4421324 bin=GWF2_Lentisphaerae_50_93 species=Granulicella mallensis genus=Granulicella taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
amidohydrolase
Tax=RIFOXYB12_FULL_Lentisphaerae_65_16_curated
berkeley_reactor_200306_planktonic_scaffold_302219_38
Verrucomicrobia bacterium IMCC26134, Verrucomicrobia, Bacteria

Not on your lists

39148..40167
DNA (1020bp) protein (340aa)
Alcohol dehydrogenase zinc-binding domain protein n=1 Tax=Coraliomargarita akajimensis (strain DSM 45221 / IAM 15411 / JCM 23193 / KCTC 12865) RepID=D5EPK3_CORAD
sorbitol dehydrogenase
Sorbitol dehydrogenase {ECO:0000313|EMBL:AKC82683.1}; TaxID=1637999 species="Bacteria; Verrucomicrobia; unclassified Verrucomicrobia.;" source="Verrucomicrobia bacterium IMCC26134.;"
berkeley_reactor_200306_planktonic_scaffold_302219_39

Not on your lists

40208..40597
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DMM8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD87879.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
transport protein RbsD/FucU
berkeley_reactor_200306_planktonic_scaffold_302219_40
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

40652..42124
DNA (1473bp) protein (491aa)
Major facilitator superfamily MFS_1 n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZS29_OPITP
major facilitator transporter
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:ACB74705.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
berkeley_reactor_200306_planktonic_scaffold_302219_41
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

42215..42748
DNA (534bp) protein (178aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZRZ7_OPITP
ECF subfamily RNA polymerase sigma-24 factor
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACB74673.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
berkeley_reactor_200306_planktonic_scaffold_302219_42
Opitutus terrae, Opitutus, Opitutales, Opitutae, Verrucomicrobia, Bacteria

Not on your lists

42749..45052
DNA (2304bp) protein (768aa)
Serine/threonine protein kinase n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZRZ8_OPITP
serine/threonine protein kinase
Serine/threonine protein kinase {ECO:0000313|EMBL:ACB74674.1}; TaxID=452637 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus.;" source="Opitutus terrae (strain DSM 11246 / PB90-1).;"
berkeley_reactor_200306_planktonic_scaffold_302219_43
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

45543..48638
DNA (3096bp) protein (1032aa)
Immunoglobulin I-set domain protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XQP7_9BACT
Immunoglobulin I-set domain protein {ECO:0000313|EMBL:EEF57829.1}; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_302219_44
RBG_16_Planctomycetes_55_9_curated, Phycisphaerae, Planctomycetes, Bacteria

Not on your lists

48762..49643
DNA (882bp) protein (294aa)
hypothetical protein n=1 Tax=Verrucomicrobia bacterium SCGC AAA164-E04 RepID=UPI00038292B3
hypothetical protein
Tax=RBG_16_Planctomycetes_55_9_curated
berkeley_reactor_200306_planktonic_scaffold_302219_45
Flavobacterium rivuli, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

49803..51515
DNA (1713bp) protein (571aa)
hypothetical protein n=1 Tax=Cytophagales str. B6 RepID=UPI0003B62813
Alpha-L-fucosidase {ECO:0000313|EMBL:KGO85185.1}; TaxID=1121895 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium rivuli WB 3.3-2 = DSM 21788.;"
alpha-L-fucosidase
berkeley_reactor_200306_planktonic_scaffold_302219_46
GWF2_Lentisphaerae_50_93_curated, Lentisphaerae, Bacteria

Not on your lists

51521..54931
DNA (3411bp) protein (1137aa)
alpha-L-fucosidase (EC:3.2.1.51)
Alpha-L-fucosidase id=3838017 bin=GWF2_Lentisphaerae_50_93 species=Fibrella aestuarina genus=Fibrella taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Lentisphaerae_50_93 organism_group=Lentisphaerae organism_desc=gwf2_scaffold_392 has partial 16S
Tax=GWF2_Lentisphaerae_50_93_curated
Displaying items 31-47 of 47 in total

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