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berkeley_reactor_200306_planktonic_scaffold_302219_35

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(36241..37143)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, AraC family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D5Y6_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 46.2
  • Coverage: 277.0
  • Bit_score: 263
  • Evalue 2.40e-67
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 45.2
  • Coverage: 279.0
  • Bit_score: 232
  • Evalue 9.90e-59
Tax=RIFCSPLOWO2_12_FULL_Verrucomicrobia_64_8_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 50.7
  • Coverage: 282.0
  • Bit_score: 297
  • Evalue 1.20e-77

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Taxonomy

RLO_Verrucomicrobia_64_8 → Opitutae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 903
ATGAAACGTCCCCCCGCGCGACCGGCCGCCCAATCCGCCTTGAACGCCACGCCGGAATTCTTTTCCGCCCAGGTGATCGCGGTGCGGCGCTTCTACTTGAATCTTAACCCTCCGGCCAGCGAGCGTCTGGCCGTGGTCTGCGGCGGGCTGGAAGATTGCCAGCCGGACTATGCCGTTCAACGCGACACGTTTCCATTTTACTCGGTCGAATATGTGGCACGGGGCCGGGGTTCGCTCACCTTGGGCCAACGCCATCACCGCCTTGTATCCGGGCGATTGTTCGCTTACGGGCCGGGCATTCGACACACCATTCAATCCGATTCCGATGTCCCCTTGGTCAAATATTTCGTGGATTTCACCGGTCAAAATGCCGGGCGATTGTTGAAAGCCGCGCGTCTCCGGCCCGGTCAGGTGGCCGATATTTTTCCGCCGCACGAGGCTCAAGGCCTGTTCGACGAGCTGATCGCCAGCGGCATGAAAGGCACGCCCCGGAGCCGGGAACTTTGCCTGCGCCTTTTGGAATGTCTGTTGCTGAAAATTTCCGAAGCCCACGCGCCGGTCGAAGGAATGGAAACCCGCGCCTTCACCACCTATCAACAATGCCGGGAACATTTGCAACGGCATTTTCTCCGCTTGCGGACCCTGGACCAGCTCGCCGAGGAATGTCATGCCGACCGGGCCTATCTTTGCCGTTTATTCCGGCGCTACGATCACCAAAGCCCCTATCAGTATTTATTGCGCCTGAAATTGAAGGCCGCCGCCGAATTACTGAAGACGCGCGGCGCCATGGTCAAGCAGGTGGCCGATCAGGTTGGGTTTGGGGATGCCTGTCATTTTTCACGCACGTTCAAAGCCGCATTCGGACTCTCTCCGGATGCCTTTCGACATCTGCGGCAAATTTAA
PROTEIN sequence
Length: 301
MKRPPARPAAQSALNATPEFFSAQVIAVRRFYLNLNPPASERLAVVCGGLEDCQPDYAVQRDTFPFYSVEYVARGRGSLTLGQRHHRLVSGRLFAYGPGIRHTIQSDSDVPLVKYFVDFTGQNAGRLLKAARLRPGQVADIFPPHEAQGLFDELIASGMKGTPRSRELCLRLLECLLLKISEAHAPVEGMETRAFTTYQQCREHLQRHFLRLRTLDQLAEECHADRAYLCRLFRRYDHQSPYQYLLRLKLKAAAELLKTRGAMVKQVADQVGFGDACHFSRTFKAAFGLSPDAFRHLRQI*