ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_310271_86

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(105190..105876)

Top 3 Functional Annotations

Value Algorithm Source
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_01401};; Peptide-methionine (S)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401}; TaxID=1457154 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-01.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.9
  • Coverage: 182.0
  • Bit_score: 254
  • Evalue 9.10e-65
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Coraliomargarita akajimensis (strain DSM 45221 / IAM 15411 / JCM 23193 / KCTC 12865) RepID=D5EP66_CORAD similarity UNIREF
DB: UNIREF100
  • Identity: 57.9
  • Coverage: 209.0
  • Bit_score: 239
  • Evalue 2.20e-60
peptide methionine sulfoxide reductase similarity KEGG
DB: KEGG
  • Identity: 57.9
  • Coverage: 209.0
  • Bit_score: 239
  • Evalue 6.10e-61

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Candidatus Accumulibacter sp. SK-01 → Candidatus Accumulibacter → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 687
ATGACTGTCGAAACCAAAATGAAACATCTCCTGCCATTATTGTTTGCCGTCTCCGCCTTGAGCGTGTCCTGCACGCGCGCCGAACCGCCGACAACCTCCAGTTCCGTCCCCATGAATAATCCTGAATCCCAATCGCCCGCAACGAACCACCTTGAAGTCGCCACGCTGGGCGGCGGCTGTTTCTGGTGCATGGAAGCTGTTTACGAACGGCTGCCCGGCGTGGTTTCCGTCACCAGCGGATTCGCCGGCGGTCACACGGAAAATCCCACCTACCAGCAGGTCTGCACCGGCACCACCGGTCACGCGGAGGTCACGCAGATTGCCTTTGATCCCGCCAAGATTTCCTACGCCAGGCTGCTGGATGTTTTCTGGCAGGCGCATGACCCGACCACCCTGAACCGCCAGGGCGCGGATGAGGGCACACAATATCGCTCCATCATTTTGTATCACAACGAACGACAAAAGCTCATCGCGGAAAAATCCAAGCTCGCCGCGCAGGCGGATTTTTCCCATCCAATCGTGACCGAAATCGTGCCCTTCAAGAAATTTTATCCGGCCGAGGCGTATCATCAGGGATATTACGACGACAACTCCAGCCAGCCGTATTGCCAGGTCGTCATCAAGCCCAAGCTGGAAAAATTGGAACACAAGCAGGTCATCGAGCCCACCGTCCAGACACGGAAATAA
PROTEIN sequence
Length: 229
MTVETKMKHLLPLLFAVSALSVSCTRAEPPTTSSSVPMNNPESQSPATNHLEVATLGGGCFWCMEAVYERLPGVVSVTSGFAGGHTENPTYQQVCTGTTGHAEVTQIAFDPAKISYARLLDVFWQAHDPTTLNRQGADEGTQYRSIILYHNERQKLIAEKSKLAAQADFSHPIVTEIVPFKKFYPAEAYHQGYYDDNSSQPYCQVVIKPKLEKLEHKQVIEPTVQTRK*