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berkeley_reactor_200306_planktonic_scaffold_310897_31

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_58_30

near complete RP 49 / 55 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: comp(44565..45533)

Top 3 Functional Annotations

Value Algorithm Source
Tyrosine recombinase XerC n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XL74_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 68.3
  • Coverage: 322.0
  • Bit_score: 442
  • Evalue 3.10e-121
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedosphaera parvula (strain Ellin514).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.3
  • Coverage: 322.0
  • Bit_score: 442
  • Evalue 4.40e-121
integrase similarity KEGG
DB: KEGG
  • Identity: 45.5
  • Coverage: 321.0
  • Bit_score: 239
  • Evalue 8.70e-61

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 969
ATGAATGCAACCGAATCTTCTTCCGTCGAGGTCCGCGACCCGTGGATTCAAAAATTCCTGACGCACCTGGCGGCGGATCGCGGCGCGTCGGTGTTCACCCAGCGGAATTATGCGCACGCGCTGTTTGAATTTGCCCGCTGGCATTTGACCGAGCGCAAATCCGCGGCGAACTGGGCGGCGCTGCAGCGCGACGACTTCCGCAGCTACCTGCGTTTTCTGGGGCGAAGCAACTTGAGCCGCGCGGCCACGGCACTGCGCTTTTCCGCGCTGCGCACGTTTTACAAATTCCTGATGCGGCACGGCGTCGTGGAAAGCCTGCCGATCAAAAATCTTTCGCTCCCGAAGCCGGAAAAACGGCTGCCCAAGTTTTTGACCATCCAGCAGATGAAAGATTTGCTTGAAGCGCCGCAGAAGCTGTTCGCCGCGCAGAAAGATCGCAAAGGTCCGGGCCGGCCGGCTTCGGCGGAGGTTTGCCTGCGCGACCTCGCGGTGCTGGAAACAATTTATTCCTGCGGCCTGCGCGTGAGCGAACTGTGCGGTCTGCGCGTGGACGATGTGAATTTCAACGAGCAGATTCTCCGCGTCCGCGGCAAAGGCAAAAAGGAACGATTGTTGCCGGTGGGCGAACCGGCGTTGCGCGCGATTCAAAGCTACTGGGATTCGCTGATGGCTCCGCCGGCGGGCGCGCAGCCGGTCTTTTGCGCCGACACCAAAAAGCGTTCGCCGCTGAATCGTATTCAACTGGCGCGGCGCTTGAAACAATATCTGGTCATCGCCGGACTGGACCCCGCACTCACGCCGCACAAACTGCGGCACAGCTACGCCACGCATCTGCTCGACGCCGGCGCGGATTTGCGCAGCGTGCAGGAACTCCTTGGCCACGCCCATCTCATCACCACCCAGGTTTACACGCACGTGACCACGGAGCGTTTGAAAAAAGCCTACGACGCGGCGCATCCGCGCGCCTGA
PROTEIN sequence
Length: 323
MNATESSSVEVRDPWIQKFLTHLAADRGASVFTQRNYAHALFEFARWHLTERKSAANWAALQRDDFRSYLRFLGRSNLSRAATALRFSALRTFYKFLMRHGVVESLPIKNLSLPKPEKRLPKFLTIQQMKDLLEAPQKLFAAQKDRKGPGRPASAEVCLRDLAVLETIYSCGLRVSELCGLRVDDVNFNEQILRVRGKGKKERLLPVGEPALRAIQSYWDSLMAPPAGAQPVFCADTKKRSPLNRIQLARRLKQYLVIAGLDPALTPHKLRHSYATHLLDAGADLRSVQELLGHAHLITTQVYTHVTTERLKKAYDAAHPRA*