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berkeley_reactor_200306_planktonic_scaffold_4941_105

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(100300..101796)

Top 3 Functional Annotations

Value Algorithm Source
GH3 auxin-responsive promoter n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T919_NIAKG similarity UNIREF
DB: UNIREF100
  • Identity: 72.4
  • Coverage: 493.0
  • Bit_score: 728
  • Evalue 2.60e-207
GH3 auxin-responsive promoter similarity KEGG
DB: KEGG
  • Identity: 72.4
  • Coverage: 493.0
  • Bit_score: 728
  • Evalue 7.30e-208
GH3 auxin-responsive promoter {ECO:0000313|EMBL:AEV96972.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 72.4
  • Coverage: 493.0
  • Bit_score: 728
  • Evalue 3.60e-207

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Taxonomy

Niastella koreensis → Niastella → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1497
ATGAAAATAAAGTCTTTCTTAGCCAAGCCCTACGCAGCTGTTGTGCATAAACGGATACAAAAGTCGATGCAAACCGCCGTTGCAGACCAGCAAACCACCCTGTTACACCTGATCAAAAACGGTTCCCGCACACAGTTTGGACGCGACCATAAACTGAAAGACACCGGTAGTTACGACGAATTTAAAGCTGCCATTCCTATCCGCGACTACGAAGGAATAACCCCTTATATCGACCAGATCAAAGAAGGCAAACAAAACGTACTCTGGCACGGCAAACCGCTTTACTTTGCAAAGACCTCGGGTACCACCAGCGGCGTGAAATACATACCCATCAGTAAAGACTCCATATCCAACCATATCAATACCGCCCGCAATGCCCTGCTCTGCTATATGGTAGAAAGCGGCAATACGGCTTTTGCAGACGGCAAAATGATTTTCCTTTCGGGTTCGCCTACACTTGAACGCATAGCCGGTATACCCACCGGCAGGCTGAGCGGTATCGTAAACCACCATGTGCCCGGTTACCTGCGCAGGAACCAGATGCCCAGTTACGAAACCAATTGTATAGAAGACTGGGAAACCAAACTCGATAAGATCGTAACGGAAACCCTGGGACAGAACATGACCCTGATCAGTGGCATTCCACCCTGGATGCAGATGTACTTCGATTGGCTGATGGAGAAAGGGGAGCATCGTAAGATAAAAGATATCTTCCCGAACCTGCAGGTGCTCGTACACGGCGGCGTCAACTTCGAACCCTACCGGCAGAAACTGCTCGACAGCATCGGCAAGTCTATAGATACCATCGAGACCTTCCCGGCCTCCGAAGGTTTCTTTGCCTTCCAGGACACGCTCGACCAGGAAGGCCTGTTGCTGAATACCGCCTCCGGTATCTTCTTCGAATTTATACCGGCCCAGGAAATCTTTAACGATAATCCTACGCGGCTTTCGCTGAGCGAAGTAAAGCTGGACGAAAACTATGCCCTCATCATCAACAGCAATGCGGGACTGTGGGGTTATAACATCGGCGACACCGTAAAATTCGTAAGTCTGAACCCTTACCGCATCGTCGTTACCGGCCGTACTAAACATTTTATATCCGCCTTCGGCGAACACGTGATCGCCGAAGAAGTAGAACATGCCCTGATGAAAACGGCCGCCAGGCACAACGTTAAGATCGTTGAGTTTACCGTAGCGCCGATGATCCAGACCCATGGCGAACTGCCCTTCCACGAATGGTTCGTAGAGTTCGAGGAAGCGCCGGGCAACCTGCCCGCATTTGCCGCAGAAGTAGACCAGGAGCTGCGTACCAAAAATATTTATTATGACGACCTGATCCGGGGCGCGATCCTGCAGCCGCTGAAAATACGGTCGTTGCGCCGTAATGCCTTTATTGACTATATGAAATCGATCGGCAAACTGGGCGGACAAAACAAGACCCCACGCCTCAGCAACGACCGCAAGCTGGCCGATGCCCTGCTTCAGATAGCGCGTTAA
PROTEIN sequence
Length: 499
MKIKSFLAKPYAAVVHKRIQKSMQTAVADQQTTLLHLIKNGSRTQFGRDHKLKDTGSYDEFKAAIPIRDYEGITPYIDQIKEGKQNVLWHGKPLYFAKTSGTTSGVKYIPISKDSISNHINTARNALLCYMVESGNTAFADGKMIFLSGSPTLERIAGIPTGRLSGIVNHHVPGYLRRNQMPSYETNCIEDWETKLDKIVTETLGQNMTLISGIPPWMQMYFDWLMEKGEHRKIKDIFPNLQVLVHGGVNFEPYRQKLLDSIGKSIDTIETFPASEGFFAFQDTLDQEGLLLNTASGIFFEFIPAQEIFNDNPTRLSLSEVKLDENYALIINSNAGLWGYNIGDTVKFVSLNPYRIVVTGRTKHFISAFGEHVIAEEVEHALMKTAARHNVKIVEFTVAPMIQTHGELPFHEWFVEFEEAPGNLPAFAAEVDQELRTKNIYYDDLIRGAILQPLKIRSLRRNAFIDYMKSIGKLGGQNKTPRLSNDRKLADALLQIAR*