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berkeley_reactor_200306_planktonic_scaffold_44244_79

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(74850..77639)

Top 3 Functional Annotations

Value Algorithm Source
ATP-dependent DNA ligase n=1 Tax=Dyadobacter beijingensis RepID=UPI000379B38C similarity UNIREF
DB: UNIREF100
  • Identity: 56.7
  • Coverage: 947.0
  • Bit_score: 1074
  • Evalue 0.0
DNA ligase D {ECO:0000313|EMBL:ACT91634.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.3
  • Coverage: 934.0
  • Bit_score: 1058
  • Evalue 0.0
DNA ligase D similarity KEGG
DB: KEGG
  • Identity: 56.5
  • Coverage: 934.0
  • Bit_score: 1058
  • Evalue 0.0

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Taxonomy

Dyadobacter fermentans → Dyadobacter → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 2790
ATGTCGCTGAGTTCCTATAAACATAAACGCAACAGCAAAACCACGCCGGAGCCCTTTGGCGGCGCACATACTGCAAAAAATGCATTACGGTTTGTGATCCAGAAACACGCCGCATCGCATCTGCATTACGATTTCCGCCTGGAATTGCATGGTGTTCTGAAAAGCTGGGCGGTACCCAAAGGCCCATCACTCAATCCTTCCGACAAAAGACTGGCGATGATGGTTGAGGATCATCCTTATGCTTACAAAGACTTCGAAGGTATTATCCCCGAAGGTAACTATGGTGCGGGTACGGTTATCGTATGGGATGAAGGCACCTATACACCTATCGACGAAACAAAAGGTAAAAAGGCACAGGAACGGTCGCTGAGCAAACAGTTGAAATCGGGCTCGCTGAAATTCCGGCTTTCCGGCAGCAAACTGAACGGAGAATTCGCCCTGGTAAAAACCAATATGGCCCAAAACTCCTGGTTATTGATCAAACACAAAGACGAATATGCTGCAACCACGGATATTACACGGAAGGCGCGTTCGGTTATCAGCAATAAAACACTGAGCGAGGTAAAAGCAACACCAGAGACGGGAAACAAGCAACAGGCAAGGACCTCAGCTTCAAAAACACATACGGCAACACCTGCCAAAAGCGCTAAGGCAGCGACCAGGAGCACTAAAGCGCCGGCGAAGAAGAATAAGAGCACATCAAAAGAAGTACCAGCCAAATACCCGGCAGCGGTTACATCTATCCTGGAAGGCTTGCCCCGCCAGGCTTTCCCACGGCACTTATCGCCTATGCTGGCTACCCTGACAGACGCCCCTTTCGATGACAGCGATTGGGAATACGAAATAAAATGGGATGGTTACCGCGCCCTGGCCTTTCGCAAGGGAAAGACAACGACGATCAAATCGAGGAATGACAAAGTTTTCGATGAAAAATTCTACCCGGTATTCGATGCGGTTAAGGCCTGGGATATCGAAGCCGTTGTCGATGGCGAAATAGTGGCCGTGAATGAAAAAGGTATTGCCCGATTTGGCCAGCTCCAGAACTGGCGCAGCGAAGCAGATGGCCCCTTGTTATATTATGTATTCGATGTGCTATGGCTTAACGGCAAACAGACGACCAACTTACCTTTAAGCGATCGCATGGCCCTGCTCCAGGCAATTATACCCCCTGGCGAGGGCATCATACGCCAGGGGCTTTCGGTTACCGGAAGAGGAACCGACCTCTTCAAGGCAGCCCGGGACACAGGCCTGGAAGGCATTATAGCCAAGCGGTTGGATAGCCCGTACGAACCCGGCATCCGTACCCACGATTGGCTCAAGATCAAAGTACAAAAGCGCCAGGAGGTAGTTATAGGCGGTTATACCCGCAACCAGGATTCTCCGAAACTATTCAGCTCCTTGTTACTTGGCGTATACGATAAGGGTAAACTGTTATATGCCGGCAAAGTAGGCACAGGCTTTAACCAGCGGCAACAGGAGGAAATGCTGCAGTTGTTCAAACCGCTGGTGCGCAAGACAAGCCCTTTCAAAACAATACCCGATTATAATAAACCATCGCGTTTCAGACCCAATCCACCGGACGCCGAGGTGACCTGGTTAAGGCCGCAACTGGTCTGTGAAATCACCTTTGCGGAAATAACGGGTGATGGCGTATTCCGTCATCCTGCATTCGTGGCGTTACGGGAAGATAAGCAAGCAACCGATGTTGTACGGGAACAGGAAGAGCCTGTGACTGCAGCGATACAAGCCACTACAAACCGTAAAAAGATGCAGCAAAGCAAGACTAAAAAAACCAGGGCAGCCATAAAAAAACAACGGATCGTTACGCCACCTGCAAAACGCGGCAATACGAGCCTGCTTAATCCGACGGATAAATCCCAGGTCAGGAAAATCGGGCGCAAGGAACTCAGCTTTACCAATCTCGATAAGTTGTTCTGGCCGCGGGAACGAATAACCAAGAGAGACCTGGTCGAGTATTATCACCAGGTAGCGGCTTATATCCTGCCTTATATCAAAGACCGGCCGCAGTCGCTCAACCGCTACCCTGACGGCTATAAGGGCAAAAGCTTTTACCAGAAAGACGTTACCGGCAAGGTGCCCGACTGGGCCGAAACTTATCTTTACCACAGCGAAGGCGATAAGGAGGACAAACATTTCCTGGTAGCGAAAGATGAAGCCAGCCTGCTGTTTATGGTCAACTCCGGTTGTATCGAGATCAACCCCTGGAACAGCACGATCAAAAAACCGGATCATCCCGACTGGTGCCTGCTGGACCTGGATCCCGGCACCCGTACGACTTTCAACCAGGTAATCGATGCGGCACAAGCGATCCATACACTGCTGAACGACCTGGATGTGCCCTCCTACCCGAAGACATCGGGATCAACCGGTCTGCATATCTATATACCCTTAGGCAAAAAATACACCTTTGAACAATCCAAAGAGTTTGCACGCCTTATCGTAACCCTGGTACAGGAACAGACCGCCGGCTTCACCAGCCTGGAACGCCAGGTAAAGGCCAGGAAGGGTAAACTCTATCTGGACTTCCTGCAAAACCGGCCACAGGCCACACTTGCAGCGCCCTACTCCGTGCGGCCTAAACCCGGGGCAACGGTTTCCATGCCCTTACATTGGGACGAGGTACAGCATGGTCTCAGGATGAGCGATTTTACGTTAAAGAATGTACCTGCATTACTGGCCGAACGCGGCGACCTGTTTAAAGGCGTGCTGGGCAAGGGCATCCATATGCACAACATCCTGAAGCAGCTGCAACAAAAGAAGGATCAATAA
PROTEIN sequence
Length: 930
MSLSSYKHKRNSKTTPEPFGGAHTAKNALRFVIQKHAASHLHYDFRLELHGVLKSWAVPKGPSLNPSDKRLAMMVEDHPYAYKDFEGIIPEGNYGAGTVIVWDEGTYTPIDETKGKKAQERSLSKQLKSGSLKFRLSGSKLNGEFALVKTNMAQNSWLLIKHKDEYAATTDITRKARSVISNKTLSEVKATPETGNKQQARTSASKTHTATPAKSAKAATRSTKAPAKKNKSTSKEVPAKYPAAVTSILEGLPRQAFPRHLSPMLATLTDAPFDDSDWEYEIKWDGYRALAFRKGKTTTIKSRNDKVFDEKFYPVFDAVKAWDIEAVVDGEIVAVNEKGIARFGQLQNWRSEADGPLLYYVFDVLWLNGKQTTNLPLSDRMALLQAIIPPGEGIIRQGLSVTGRGTDLFKAARDTGLEGIIAKRLDSPYEPGIRTHDWLKIKVQKRQEVVIGGYTRNQDSPKLFSSLLLGVYDKGKLLYAGKVGTGFNQRQQEEMLQLFKPLVRKTSPFKTIPDYNKPSRFRPNPPDAEVTWLRPQLVCEITFAEITGDGVFRHPAFVALREDKQATDVVREQEEPVTAAIQATTNRKKMQQSKTKKTRAAIKKQRIVTPPAKRGNTSLLNPTDKSQVRKIGRKELSFTNLDKLFWPRERITKRDLVEYYHQVAAYILPYIKDRPQSLNRYPDGYKGKSFYQKDVTGKVPDWAETYLYHSEGDKEDKHFLVAKDEASLLFMVNSGCIEINPWNSTIKKPDHPDWCLLDLDPGTRTTFNQVIDAAQAIHTLLNDLDVPSYPKTSGSTGLHIYIPLGKKYTFEQSKEFARLIVTLVQEQTAGFTSLERQVKARKGKLYLDFLQNRPQATLAAPYSVRPKPGATVSMPLHWDEVQHGLRMSDFTLKNVPALLAERGDLFKGVLGKGIHMHNILKQLQQKKDQ*