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berkeley_reactor_200306_planktonic_scaffold_123701_130

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: 149614..150009

Top 3 Functional Annotations

Value Algorithm Source
transcriptional regulator n=1 Tax=Pedobacter agri RepID=UPI000299E277 similarity UNIREF
DB: UNIREF100
  • Identity: 66.7
  • Coverage: 129.0
  • Bit_score: 172
  • Evalue 1.90e-40
Transcriptional regulator {ECO:0000313|EMBL:KIA94095.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.4
  • Coverage: 129.0
  • Bit_score: 172
  • Evalue 2.60e-40
CopY family transcriptional repressor similarity KEGG
DB: KEGG
  • Identity: 70.0
  • Coverage: 120.0
  • Bit_score: 167
  • Evalue 1.30e-39

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Taxonomy

Pedobacter kyungheensis → Pedobacter → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 396
ATGAAACCGACAGATAAGAACAGACAAGACCCCGAACCAACGAAATCCGAGCTGGAGATCCTGCAGGTATTGTGGGAGGAAGGTCCTTCGACGGTAAGGGCGGTAAATAGCAAGCTTAATGAGCAAAGAGAGCTCAACTATACCTCTACGCTGAAACTGATGCAGATTATGGTTGAAAAGGGCCTGCTGCTGCGCGACGAAAGCAGTATGAAGCATATTTACCGGCCGGCACAGGAAGAGCAGAAAACCAAAGGCTACCTGCTCGACCGCTTTGTAAAAACCCTGTATAAAGGTTCGCCTTCAAGCCTGATGATGCAACTGCTGGGCAACCAGGAAACTTCCAAAGAAGAACTGGATGCGATCAGGGACCTGTTGCAACAAATGGATCAAAAATAA
PROTEIN sequence
Length: 132
MKPTDKNRQDPEPTKSELEILQVLWEEGPSTVRAVNSKLNEQRELNYTSTLKLMQIMVEKGLLLRDESSMKHIYRPAQEEQKTKGYLLDRFVKTLYKGSPSSLMMQLLGNQETSKEELDAIRDLLQQMDQK*