ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_164454_170

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(184020..185378)

Top 3 Functional Annotations

Value Algorithm Source
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344}; EC=6.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344};; UDP-N-acetylmuramoyl-L-alanine synthetase {ECO:0000256|HAMAP-Rule:MF_00046}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.7
  • Coverage: 452.0
  • Bit_score: 574
  • Evalue 1.00e-160
UDP-N-acetylmuramate--L-alanine ligase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PRE1_CHIPD similarity UNIREF
DB: UNIREF100
  • Identity: 61.7
  • Coverage: 452.0
  • Bit_score: 574
  • Evalue 7.40e-161
murC; UDP-N-acetylmuramate--L-alanine ligase similarity KEGG
DB: KEGG
  • Identity: 61.7
  • Coverage: 452.0
  • Bit_score: 574
  • Evalue 2.10e-161

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Chitinophaga pinensis → Chitinophaga → Sphingobacteriales → Sphingobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1359
ATGAATATCAATACCTTAAAGAACATCTACTTTATCGGCATCGGCGGCATCGGTATGAGCGCCCTAGCCCGCTTCTTCAACGAACGCGGCGTAAGGGTGAGCGGTTACGACCGTACCGAAACGGCGCTCACCAGGCAACTGGCGGCCGAGGGTATGGCTATTCATTACGAAGACAATATTGAACTGATTGATAAAGATGCGGAGCTGGTGGTATATACACCCGCTATTCCTGCAGATCAGCAGGAACTGAACTGGTTGCGTGATCACCGGTACCCCGTGTTTAAACGCTCGGATGTATTGCAATGGATCACCGAAAGTATGGTAGCCGTTACCGTAGCCGGTACCCATGGCAAGACCACGATTTCGAATATGATCGCCCATATCCTGCGCGATTCAGGGTTTGGCTGTAATGCTTTCCTGGGTGGTATTTCGTCGAACTACAACAGCAACTACTGGGGTAGCGACAACAATGTGGCTGTGATCGAAGCCGATGAGTACGACCGGAGCTTCCTGAAACTGAAACCCGAGATTGCCGTACTGACGGCCATGGATGCCGATCACCTCGACATCTACGGCACCGTGGAAGAACTGGAAAATGCTTTTGTACAGTACACTAAAAATATAAAAGCGGGTGGTACCCTGTGGTACCGGCATGGCCTGCCCCACGCGGCCCGGCTCGAAGCGGACCATAAACGTACCTATAGCCTGCAGAACGATGCGGCCGGCGTATATGCCAGCCAGGTGCAGATCAACGACGGCGGTTATATTTTCGACGTACAGGGCGGCGACTGGCAGCTGGAACAGGTGCACCTCCATATCGGGGGCATGCACAATGTAGAGAATTGTATCGTGGCCATTGCCGTGGCACAGCAACTGGGCGTAGCCGGCGACCTGATCCGTAATGCCGTAGCCTCGTTCAAAGGCGTAAAGAGAAGGTTTGAATATGTAGTGAAGAACGACAAAGTGGTATATATAGACGACTATGCGCACCACCCCGAGGAGCTGGCGGCCCTGATCAAAAGCGCCAAGACGCTCTTCCCCGGTAAACGTTGTGTCGTGGCTTTCCAGCCGCATCTCTTCAGCCGTACCCGCGACTTTGCCGATGGCTTTGCCCATAGCCTGGACATGGCCGACGAAGTACTGCTGCTGGATATCTACCCGGCAAGAGAACTGCCGATGGAAGGCGTAACCGTGCAGATGATCGCAGACCGGATGGCAAACCCCAACCATACCATCTTATCCAAAGAAGGTTTGGTCGAATATGCCCGCAGAGCGCCCATCGAACTGTTGATTACTGCAGGTGCAGGCGATATCGACAAACTGGTAGCGCCGATCAAAGCAGCATTGGAAAGTAAATAA
PROTEIN sequence
Length: 453
MNINTLKNIYFIGIGGIGMSALARFFNERGVRVSGYDRTETALTRQLAAEGMAIHYEDNIELIDKDAELVVYTPAIPADQQELNWLRDHRYPVFKRSDVLQWITESMVAVTVAGTHGKTTISNMIAHILRDSGFGCNAFLGGISSNYNSNYWGSDNNVAVIEADEYDRSFLKLKPEIAVLTAMDADHLDIYGTVEELENAFVQYTKNIKAGGTLWYRHGLPHAARLEADHKRTYSLQNDAAGVYASQVQINDGGYIFDVQGGDWQLEQVHLHIGGMHNVENCIVAIAVAQQLGVAGDLIRNAVASFKGVKRRFEYVVKNDKVVYIDDYAHHPEELAALIKSAKTLFPGKRCVVAFQPHLFSRTRDFADGFAHSLDMADEVLLLDIYPARELPMEGVTVQMIADRMANPNHTILSKEGLVEYARRAPIELLITAGAGDIDKLVAPIKAALESK*