ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_176984_93

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(106376..107215)

Top 3 Functional Annotations

Value Algorithm Source
Putative peptidoglycan-binding domain-containing protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CLZ2_9FLAO similarity UNIREF
DB: UNIREF100
  • Identity: 50.5
  • Coverage: 281.0
  • Bit_score: 273
  • Evalue 1.30e-70
Hydrolase {ECO:0000313|EMBL:KFF17688.1}; TaxID=1233950 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. JM1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 52.3
  • Coverage: 279.0
  • Bit_score: 285
  • Evalue 5.90e-74
phage-related protein (hydrolase) similarity KEGG
DB: KEGG
  • Identity: 50.5
  • Coverage: 279.0
  • Bit_score: 269
  • Evalue 6.80e-70

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Chryseobacterium sp. JM1 → Chryseobacterium → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 840
ATGATTTTACTCAAACTGAATGCCAAAGGCGATGCTGTAACAATGTTGCAGGAATTGCTCAACGAATTTAATTACGACCTGGTCGTTAATGGTGTTTTTAATGCGGCAACGGAGAAGGCCGTACGCGATTTTCAAGCCAGGAACGGGCTCGTAAGCGATGGCGTGGTTTATACCAAAACCTGGACGCGCCTGCTGAATAACGTTCCGGCCGACCTGAACGATATGGAAGCGCGCTTCCTGAACGAACAGGATATTATTGCAACGGCAAAGCGACTCGATATCGAAGTGGCCGTGCTGAAAGCCGTAAACGAGGTGGAAAGCCGCGGGCGGGGTTTTAATGTCGACGGCAGTGTCAAGATCCTGTTTGAAGGACACGTCTTCTGGGACCAGCTTAAAAAAAGGGGAATAGATCCCAATAAGTATGTAAAGGGAAATGAATCTGTATTGTATCCAAAATGGACCAAGAAGTTTTACCTGGGCGGCAAGGGGGAATACAACCGCTTAAACCAGGCGATTAATATTTTCGCCAATGCGCCTTCGACCGTTGCTGCCGCCGGTGCAGAAGCCGCTTATGCTTCCGCTTCCTGGGGCTTGTTCCAGATTATGGGCTATCATTTCAAATCGCTGGGATACGATGATATCATCAGTTTCGTTAGTGATATGAAGGAAAGCGAAGGCAAACAACTGGATATCTTTGCCAATTATATCGAGGTCAACAACCTGCAAAAGTTCCTGAAGAATAAGCAATGGGCCAGTTTTGCATTGCGCTACAACGGCGCAGGATACAAAGAGAATAAATACGATGAAAAACTGGCCAAGGCTTACGACAAGTACCGTTAG
PROTEIN sequence
Length: 280
MILLKLNAKGDAVTMLQELLNEFNYDLVVNGVFNAATEKAVRDFQARNGLVSDGVVYTKTWTRLLNNVPADLNDMEARFLNEQDIIATAKRLDIEVAVLKAVNEVESRGRGFNVDGSVKILFEGHVFWDQLKKRGIDPNKYVKGNESVLYPKWTKKFYLGGKGEYNRLNQAINIFANAPSTVAAAGAEAAYASASWGLFQIMGYHFKSLGYDDIISFVSDMKESEGKQLDIFANYIEVNNLQKFLKNKQWASFALRYNGAGYKENKYDEKLAKAYDKYR*