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berkeley_reactor_200306_planktonic_scaffold_176984

Search features with annotation key words

Displaying items 91-120 of 463 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
berkeley_reactor_200306_planktonic_scaffold_176984_91
unknown

Not on your lists

105700..105831
DNA (132bp) protein (44aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_176984_92
Pedobacter sp. BAL39, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

105903..106379
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Pedobacter sp. BAL39 RepID=A6EKY9_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EDM33853.1}; TaxID=391596 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. BAL39.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_176984_93
Chryseobacterium sp. JM1, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(106376..107215)
DNA (840bp) protein (280aa)
Putative peptidoglycan-binding domain-containing protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J3CLZ2_9FLAO
Hydrolase {ECO:0000313|EMBL:KFF17688.1}; TaxID=1233950 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium sp. JM1.;"
phage-related protein (hydrolase)
berkeley_reactor_200306_planktonic_scaffold_176984_94
unknown

Not on your lists

comp(107328..108071)
DNA (744bp) protein (248aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_176984_95
Amycolatopsis vancoresmycina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(108106..110196)
DNA (2091bp) protein (697aa)
Uncharacterized protein n=1 Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1HA79_9PSEU
Uncharacterized protein {ECO:0000313|EMBL:EOD60590.1}; TaxID=1292037 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vancoresmycina DSM 44592.;"
flagellar motor protein MotB
berkeley_reactor_200306_planktonic_scaffold_176984_96
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(110235..111755)
DNA (1521bp) protein (507aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NP03_9SPHI
flagellar motor protein MotB
Flagellar motor protein MotB {ECO:0000313|EMBL:AHF15144.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
berkeley_reactor_200306_planktonic_scaffold_176984_97
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(111789..112838)
DNA (1050bp) protein (350aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NP03_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:KCZ70539.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;" source="Candidatus Methanoperedens nitroreducens.;"
flagellar motor protein MotB
berkeley_reactor_200306_planktonic_scaffold_176984_98
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(112891..114525)
DNA (1635bp) protein (545aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NP03_9SPHI
flagellar motor protein MotB
Flagellar motor protein MotB {ECO:0000313|EMBL:AHF15144.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
berkeley_reactor_200306_planktonic_scaffold_176984_99
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(114592..116187)
DNA (1596bp) protein (532aa)
hypothetical protein n=1 Tax=Amycolatopsis balhimycina RepID=UPI000370D717
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF17461.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
berkeley_reactor_200306_planktonic_scaffold_176984_100
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(116226..117287)
DNA (1062bp) protein (354aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NP00_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:ETZ22009.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V48.;"
flagellar motor protein MotB
berkeley_reactor_200306_planktonic_scaffold_176984_101
Rhodanobacter thiooxydans, Rhodanobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(117399..118157)
DNA (759bp) protein (253aa)
Peptidoglycan binding domain-containing protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WEA5_9GAMM
Peptidoglycan binding domain-containing protein {ECO:0000313|EMBL:EIL97796.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;"
putative peptidoglycan-binding domain-containing protein
berkeley_reactor_200306_planktonic_scaffold_176984_102
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(118199..119626)
DNA (1428bp) protein (476aa)
AAA ATPase central domain protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NNZ9_9SPHI
ATPase AAA
ATPase AAA {ECO:0000313|EMBL:AHF15145.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
berkeley_reactor_200306_planktonic_scaffold_176984_103
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(119626..121128)
DNA (1503bp) protein (501aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NNZ8_9SPHI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF17465.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
berkeley_reactor_200306_planktonic_scaffold_176984_104
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(121128..124643)
DNA (3516bp) protein (1172aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NNZ7_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:KIC95395.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_176984_105
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(124676..129451)
DNA (4776bp) protein (1592aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NNZ6_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:KIC95396.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_176984_106
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(129490..129918)
DNA (429bp) protein (143aa)
GPW/gp25 family protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NNZ5_9SPHI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF15146.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
berkeley_reactor_200306_planktonic_scaffold_176984_107
Draconibacterium sp. JN14CK-3, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(129947..130243)
DNA (297bp) protein (99aa)
type VI secretion protein n=1 Tax=Desulfobacter curvatus RepID=UPI000368378D
Type VI secretion protein {ECO:0000313|EMBL:KJF43760.1}; TaxID=1544798 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium sp. JN14CK-3.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_176984_108
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(130280..131905)
DNA (1626bp) protein (542aa)
Rhs element Vgr protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NNZ3_9SPHI
type IV secretion protein Rhs
Type IV secretion protein Rhs {ECO:0000313|EMBL:AHF15148.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
berkeley_reactor_200306_planktonic_scaffold_176984_109
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(131928..132617)
DNA (690bp) protein (230aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NNZ2_9SPHI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKD58486.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
berkeley_reactor_200306_planktonic_scaffold_176984_110
unknown

Not on your lists

comp(132617..132781)
DNA (165bp) protein (55aa)

This feature has no annotations

berkeley_reactor_200306_planktonic_scaffold_176984_111
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(132786..133253)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NNZ0_9SPHI
Glycerol acyltransferase {ECO:0000313|EMBL:KIC95399.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
glycerol acyltransferase
berkeley_reactor_200306_planktonic_scaffold_176984_112
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(133257..133691)
DNA (435bp) protein (145aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NNY9_9SPHI
phage tail protein
Phage tail protein {ECO:0000313|EMBL:AHF15151.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
berkeley_reactor_200306_planktonic_scaffold_176984_113
Flavihumibacter solisilvae, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(133738..135183)
DNA (1446bp) protein (482aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NNY8_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:KIC95401.1}; TaxID=1349421 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter solisilvae.;"
tail sheath protein
berkeley_reactor_200306_planktonic_scaffold_176984_114
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(135196..136371)
DNA (1176bp) protein (392aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NNY7_9SPHI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF17469.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
berkeley_reactor_200306_planktonic_scaffold_176984_115
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(136374..136988)
DNA (615bp) protein (205aa)
Uncharacterized protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NNY6_9SPHI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF17470.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
berkeley_reactor_200306_planktonic_scaffold_176984_116
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

137765..138166
DNA (402bp) protein (134aa)
Nuclease A inhibitor family protein n=1 Tax=Niabella soli DSM 19437 RepID=H1NQY1_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:KIA96634.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_176984_117
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

138215..139573
DNA (1359bp) protein (453aa)
DNA/RNA non-specific endonuclease n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PJ15_CHIPD
Endonuclease {ECO:0000313|EMBL:KIA96633.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
DNA/RNA non-specific endonuclease
berkeley_reactor_200306_planktonic_scaffold_176984_118
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

139648..139980
DNA (333bp) protein (111aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00035DBFB6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF15807.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella soli DSM 19437.;"
berkeley_reactor_200306_planktonic_scaffold_176984_119
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(140033..140503)
DNA (471bp) protein (157aa)
Uncharacterized protein n=1 Tax=Flavobacterium sp. CF136 RepID=J2S7E9_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KIA95520.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyungheensis.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_176984_120
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

140681..141805
DNA (1125bp) protein (375aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PS35_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU60829.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM; 2034).;"
Displaying items 91-120 of 463 in total

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