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berkeley_reactor_200306_planktonic_scaffold_176984_101

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(117399..118157)

Top 3 Functional Annotations

Value Algorithm Source
Peptidoglycan binding domain-containing protein n=1 Tax=Rhodanobacter thiooxydans LCS2 RepID=I4WEA5_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 54.2
  • Coverage: 253.0
  • Bit_score: 285
  • Evalue 2.90e-74
Peptidoglycan binding domain-containing protein {ECO:0000313|EMBL:EIL97796.1}; TaxID=1163409 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhodanobacter.;" source="Rhodanobacter thiooxydans LCS2.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 54.2
  • Coverage: 253.0
  • Bit_score: 285
  • Evalue 4.10e-74
putative peptidoglycan-binding domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 53.8
  • Coverage: 253.0
  • Bit_score: 283
  • Evalue 3.10e-74

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Taxonomy

Rhodanobacter thiooxydans → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 759
ATGGAACTTTTAAAAAAAGGAAGTCAGGGCAGTGCAGTGAAAACGCTGCAGGAGTTATTACGCGAACTCGATTATAACGTACCGGTTACCGGTATATTCGATAATGCGACCTATGCAGCGGTACGCAGTTTCCAGGCGAGCCATCTCGATAAACATGGCATACCGCTTAAAGTAGACGGCGTAGTGGGCGATATCACCTGGTGGGCCCTGAGTAATCCGCGTACTTCCGTATCGCATGGCGTTATCGATTTTACGAAAATGCCCGATGCCGCTATGGGCGGTAGCGCTATAGGCCGTGCCGCGCTGATGGCTGCTATCGGCGAATTGAAGGCAGGAGCGGGAGAGATCGGAGGTAATAACCAGGGCAAATGGGTAAAGAAATACCTGGATCCGGTACCGCTTGGAGTGGGTAATGCCTGGTGTGCCGCATTCCTGAGCTGGTGTTTCCTGCAGGCGGTGGGCGGTGATAAGGCTAAAATGCCGTTCCGTTATACCGCGGGCGCCCGTGATCTCTTCAATCAGCTTAAAAACAAAGGCCTGGCCATTAAAGATGCCGGTCCTGCCTATATACCGCAGCCCGGCGATATCGTAGCCTGGTGGCGCGTAAGCATGGCTTCCGGGCTAGGGCATATCGCTATCGTACATCATTTTGAAGATGGCTTTTTGTATACGATCGAAGGAAACAAAGCCGCCAATGTAGCCGGTTTCGATTATGTGAAAACCAGTATGGACAAGATACTGGGCTATGCCCGGGTGTAA
PROTEIN sequence
Length: 253
MELLKKGSQGSAVKTLQELLRELDYNVPVTGIFDNATYAAVRSFQASHLDKHGIPLKVDGVVGDITWWALSNPRTSVSHGVIDFTKMPDAAMGGSAIGRAALMAAIGELKAGAGEIGGNNQGKWVKKYLDPVPLGVGNAWCAAFLSWCFLQAVGGDKAKMPFRYTAGARDLFNQLKNKGLAIKDAGPAYIPQPGDIVAWWRVSMASGLGHIAIVHHFEDGFLYTIEGNKAANVAGFDYVKTSMDKILGYARV*