ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_176984_308

Organism: 2019_SCN_bioreactor_200211_planktonic_Bacteroidetes_50_37

near complete RP 49 / 55 MC: 1 BSCG 50 / 51 ASCG 14 / 38
Location: comp(336139..336954)

Top 3 Functional Annotations

Value Algorithm Source
Putative HTH-type transcriptional regulator in mcrB 3'region n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GG99_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 58.6
  • Coverage: 268.0
  • Bit_score: 315
  • Evalue 2.80e-83
Putative HTH-type transcriptional regulator in mcrB 3'region {ECO:0000313|EMBL:CDN76576.1}; TaxID=1117645 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Elizabethkingia.;" source="Elizabethkingia anophelis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.7
  • Coverage: 268.0
  • Bit_score: 336
  • Evalue 2.80e-89
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 52.8
  • Coverage: 267.0
  • Bit_score: 291
  • Evalue 2.10e-76

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Elizabethkingia anophelis → Elizabethkingia → Flavobacteriales → Flavobacteriia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 816
ATGAACTATCAAACTTTCGAACCGGCAGCTTTGCTGGCGCCATTCGTGAAATGTTACTGGACGCTGGAAAGCGAAGCTGATGCCGTGCCGCAACGCCAGACGATCGTACCCGACGGCTGTATGGAAATGATCTTTCACTATGGCGACCTGTACCGGCAATACGCGGAAGACGGCAGTTTCCTGGTGCAGCCCCGTTGTTTTGTAATCGGCCAACTGACGCGGCCCCTGGAGATCGAAGCCTCGGGGGTAACAGGTATTTTTGCCATCCGGTTCCGGCCCGATGGCTTCCGGCCTTTTACAACGCGTTCTTTTAAAGATATGGATAACCGGGCCGTAGCCCTGGAGGACTTATTCGCAGCAGCAGGCGGGGAGCTAGCAATAGCGGTGCTTGCAGCAGCGACAACGGCCGCCAGGATCGCCCTGGTCGAAGGGTTCCTGGTCGATAGGCTGACCGATGTTGCCACGGTCGATCATATGGTAACGGCCACGGTAGACCTGATGCTGGCAGCAAAGGGACAGGTGGCGGTAGCAGCGCTTTCGGACCAGGTCGATATACATCGCCGGCAACTGGAACGGCGTTTCCGGGCGGCAATCGGGTTAAGTCCCAAGCAGCTTTCAAAAACCATCCGTATGCAACATATACTTAAACGGATATTGGAAGGAAACTATGAAAGCCTTACCTTATTGGCATACGAAGGCGCTTATTACGACCAGGCGCACTTTATCCGCGATTTTAAGGAGTTTACCGGCATTACGCCTAAAGCCTTCTTCGGGGAACACCTCAAACTCTCCGGCCTTTTTTATAAAGAAAAATAG
PROTEIN sequence
Length: 272
MNYQTFEPAALLAPFVKCYWTLESEADAVPQRQTIVPDGCMEMIFHYGDLYRQYAEDGSFLVQPRCFVIGQLTRPLEIEASGVTGIFAIRFRPDGFRPFTTRSFKDMDNRAVALEDLFAAAGGELAIAVLAAATTAARIALVEGFLVDRLTDVATVDHMVTATVDLMLAAKGQVAVAALSDQVDIHRRQLERRFRAAIGLSPKQLSKTIRMQHILKRILEGNYESLTLLAYEGAYYDQAHFIRDFKEFTGITPKAFFGEHLKLSGLFYKEK*