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berkeley_reactor_200306_planktonic_scaffold_4894_54

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: comp(49442..50773)

Top 3 Functional Annotations

Value Algorithm Source
UDP-N-acetylmuramate n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D5U0_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 69.1
  • Coverage: 444.0
  • Bit_score: 633
  • Evalue 1.00e-178
UDP-N-acetylmuramate {ECO:0000313|EMBL:EDY18143.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.1
  • Coverage: 444.0
  • Bit_score: 633
  • Evalue 1.40e-178
UDP-N-acetylmuramate--L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase similarity KEGG
DB: KEGG
  • Identity: 57.7
  • Coverage: 444.0
  • Bit_score: 527
  • Evalue 2.20e-147

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Taxonomy

Chthoniobacter flavus → Chthoniobacter → Spartobacteria → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1332
ATGGGCGCCGTGGCGGCCGCGATGCGCGACCGGGGCTATGTCATCACCGGGCAGGACGACAATGTCTACCCGCCCATGTCTACCTTCCTTGAGGGCAAGGGCATCACGATCACCAAGGGTTTCCGCCCCGAGGACATCCCGGCGGCGGATGTGATCGTGGTCGGCAATGCCATGACGCGCGGCAACGCCGCCGTCGAGGCCGTGCTGAACCGCAAGCTGTATTACCTCTCGCTGCCCGAGACGCTGAAGCAGTTCTTTCTGCGCGGCCGCCACAATCTCGTGGTCACCGGCACGCATGGCAAGACGACGACCACCTCGATGCTCACGTGGATCTTTGAGAGCACGGGGCAGGAGCCCAGCTACCTCATCGGCGGCATCCCGGCCAATCTCGGCCAGGGGTCGAAGCTGCGCGACTCGAAGTATTTCATCCTCGAGGGCGACGAGTACGACACGGCGTTTTTCGACAAGCGGTCAAAGTTCATCCACTACCTCCCCGAGTTGGTGATCGTGAACAACATCGAGTTTGACCACGCCGACATCTACAAGGACCTCGACGAGATCAAGACAAGCTTCCGCCGGCTGCTCAACATCGTGCCGGGCAATGGCATGGTGCTGATCAATGGCGACGATGCGAACTGCCTCGATGTCGCGAGCAAATGTCCCGCGCCCATCGTGGAGGTCGGCTTCTCGCCCAATGCGGGCAACCACATCGCCAACCCGCACCAGAAGGGCGGCGAGTCGTTCTTCGAGCTCTTCGGCGCGAAGTTTCAGATCCCGCTCATCGGCGACTTCAATATCCGCAACGCGGCCATGGCGGCGTCGGCGGCTCATTTCTACGGCATCCCGGTGCCGCAGATCCAGGAGGCGCTTGCCACGTTCAAGGGCATCAAGCGCCGCCAGGAAGTGCGCGGCGTCACGCGCGGGATCACGGTGATCGACGATTTCGGCCATCACCCGACCGCCATCCGGCAGACACTCGCCGGATTGCGCGAACGCTACGGCAGCGCGCGGCTGTGGGCCATCTTTGAGCCCCGGTCAAACACCACGCGCCGCGCGGTGTTCCAGGACGATCTGCCGAAGGCTTTTGTCGATGCCGACGGGGTCTTCATCGCCCGCGTCGCGCGTCTCGACCAGCTCCCCGAGGCCGATCGGCTGAACCCGGAGAAGGTCGTGGCCGACATCGCCGCGCAGGGTAAGCCCGCCTTCTACGAGCCAACCGCCGACGACATCGTGGCGAAACTTGCGCCGCTGGCGCAGGAGGGCGACGTTGTCGTGGTCTTCAGCAACGGCGGCTTCGATGGCATCCACCAAAAACTCCTCGACCGGCTCTAG
PROTEIN sequence
Length: 444
MGAVAAAMRDRGYVITGQDDNVYPPMSTFLEGKGITITKGFRPEDIPAADVIVVGNAMTRGNAAVEAVLNRKLYYLSLPETLKQFFLRGRHNLVVTGTHGKTTTTSMLTWIFESTGQEPSYLIGGIPANLGQGSKLRDSKYFILEGDEYDTAFFDKRSKFIHYLPELVIVNNIEFDHADIYKDLDEIKTSFRRLLNIVPGNGMVLINGDDANCLDVASKCPAPIVEVGFSPNAGNHIANPHQKGGESFFELFGAKFQIPLIGDFNIRNAAMAASAAHFYGIPVPQIQEALATFKGIKRRQEVRGVTRGITVIDDFGHHPTAIRQTLAGLRERYGSARLWAIFEPRSNTTRRAVFQDDLPKAFVDADGVFIARVARLDQLPEADRLNPEKVVADIAAQGKPAFYEPTADDIVAKLAPLAQEGDVVVVFSNGGFDGIHQKLLDRL*