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berkeley_reactor_200306_planktonic_scaffold_59817_54

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: 54815..55507

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, winged helix family n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D4U5_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 58.4
  • Coverage: 219.0
  • Bit_score: 258
  • Evalue 4.60e-66
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:EDY18548.1}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.4
  • Coverage: 219.0
  • Bit_score: 258
  • Evalue 6.40e-66
putative two component transcriptional regulator, winged helix family similarity KEGG
DB: KEGG
  • Identity: 53.2
  • Coverage: 231.0
  • Bit_score: 246
  • Evalue 6.60e-63

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Taxonomy

Chthoniobacter flavus → Chthoniobacter → Spartobacteria → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 693
ATGCAGGATACGGTTCTAGTCGTAGAAGATGAGTCCGATGTCGTTGATTTGCTGCGCTACAATTTGTCGCGCGCCGGGTTTGGCGTAATAATTGCCAACGATGGAGTCGAGGGCCTGGAAATGGCGCGCAAGAACCGCCCCGACGTCATTGTCCTCGATCTCATGCTTCCCCGCATGGATGGCCTCGCCGTCTGCAAGGCTCTGAAACGTGAGCCGGAAACCGAGACGATGCCCATCGTGATGCTCACCGCCAAGAGCGAACCCAACGAGCGTGTCGGCGGCCTGGAACTCGGTGCGGATGATTACGTCACCAAACCCTTCAGCCCGCGGGAACTCGTCCTGCGCGTGCAAGCCCTGCTACGCCGTCTGCGCTCCAGCCGGAGCAACGATCTGGTCACCGTCGACGCCTTTGAGGTTGATAAAAATGCCTTTGAGATTCGCCTCGACGGCAAGCGGCTCGACCTGACCACGACCGAGTTCAAGCTCCTGGCCCTGCTTATCGATCGCCGTGGCCGCATCCAGAGCCGCGAGTCGCTGCTCTTTGACGTCTGGGGATACCAGAATGCCATCGACACCCGCACGGTCGACACCCACATGCGCCGCCTCCGTGAGAAGCTCGGCGACCACGCCTCCCGTCTCGAGACGGTGCGCGGCGAAGGGTATCGCTTCAACGTGCAGGCCTCCGGCGAATGA
PROTEIN sequence
Length: 231
MQDTVLVVEDESDVVDLLRYNLSRAGFGVIIANDGVEGLEMARKNRPDVIVLDLMLPRMDGLAVCKALKREPETETMPIVMLTAKSEPNERVGGLELGADDYVTKPFSPRELVLRVQALLRRLRSSRSNDLVTVDAFEVDKNAFEIRLDGKRLDLTTTEFKLLALLIDRRGRIQSRESLLFDVWGYQNAIDTRTVDTHMRRLREKLGDHASRLETVRGEGYRFNVQASGE*