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berkeley_reactor_200306_planktonic_scaffold_59817_99

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: comp(104917..106005)

Top 3 Functional Annotations

Value Algorithm Source
Spermidine/putrescine import ATP-binding protein PotA {ECO:0000256|HAMAP-Rule:MF_01726}; EC=3.6.3.31 {ECO:0000256|HAMAP-Rule:MF_01726};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellulosum (strain So ce56) (Polyangium cellulosum (strain; So ce56)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 61.1
  • Coverage: 357.0
  • Bit_score: 428
  • Evalue 5.60e-117
Spermidine/putrescine transport system ATP-binding protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GEE0_SORC5 similarity UNIREF
DB: UNIREF100
  • Identity: 61.1
  • Coverage: 357.0
  • Bit_score: 428
  • Evalue 4.00e-117
potA2; spermidine/putrescine transport system ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 61.1
  • Coverage: 357.0
  • Bit_score: 428
  • Evalue 1.10e-117

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Taxonomy

Sorangium cellulosum → Sorangium → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1089
ATGGTGCGGGCCGTGGCTGCGATGGTGGAACTCCGCTCGATAAGTAAGGTCTTCGGGAATTTCACGGCATTGCAGGAGGTGAGCTTTGAGATCAAGGAGGGCGAGTTCATGACCTTCCTGGGGCCATCCGGATGTGGAAAGACCACATGTCTGCGCCTGATCAGCGGCTTTGACACGCCGACGAAGGGGCAGGTTTTTATCGGCGGGAAGGACGTCACCTTCGATCCACCGTATCGCCGCGACGTGAATCAGGTCTTCCAAAGTTACGCCCTGTTTCCGCATCTCACCATCGCCGACAACATCGCCTTTGGCCTGCGGATGAAAAAAGTGCCCTCCGCCGAGATCAAGCGGCGCGTGGACGATGTGATCGGAATGACCGCGCTCGAGCAGTTCGTCCATCGCAAACCCGCCCAGCTTTCCGGCGGTCAGCGCCAGCGCGTGGCCCTGGCACGGGCGATCGTCTGTGAACCCAAGGTCTTGCTGCTGGACGAGCCGTTAAGCGCCCTGGATGCAAAGTTGCGTACGCAGATGCGGGTCGAGCTCAAGCAGCTCCAGAAGAAGCTCGGCATCACCTTTATCTTTGTGACCCACGACCAGGAAGAGGCGCTCACCATGAGTGACCGCGTCGCTGTGCTCAACAACGGTCGGGTCGAGCAGATCGGCACAGTGAACGAGATTTACTACAAGCCGGCCACCCGATTTGTGGCGACGTTCATCGGGGAGACCAACATTATTGAGGCGACGGTGCTCGGTCGTGGTTCCCGCACCGTCCGGTGCCGCCTGGAAGGCGGGCTGGAACTCGAGGTGGCAAGCGTCGACCCAGCCCACGAGGGAAAAATTCTCCTTTCGCTGCGTCCGGAGAAGGTTCGCCTCTCCCGGACCAAGCCCGAGGGCAGGAATGTTTTTCCCGGCCGGATATCCGCTGAGATTTTCAAGGGAGCTGTCGATGATATCACCCTCGTCGTCGAGGGTGGGCTGGAGTTGGGGGCCTTGCTGACCAATGATGGCCAGGAAGAATACGATTTTCACGAAGGCGAAAACGTTTTCTGCCGTATTCAGCCCGAAGACATCAATATCGTCGCCAGCTGA
PROTEIN sequence
Length: 363
MVRAVAAMVELRSISKVFGNFTALQEVSFEIKEGEFMTFLGPSGCGKTTCLRLISGFDTPTKGQVFIGGKDVTFDPPYRRDVNQVFQSYALFPHLTIADNIAFGLRMKKVPSAEIKRRVDDVIGMTALEQFVHRKPAQLSGGQRQRVALARAIVCEPKVLLLDEPLSALDAKLRTQMRVELKQLQKKLGITFIFVTHDQEEALTMSDRVAVLNNGRVEQIGTVNEIYYKPATRFVATFIGETNIIEATVLGRGSRTVRCRLEGGLELEVASVDPAHEGKILLSLRPEKVRLSRTKPEGRNVFPGRISAEIFKGAVDDITLVVEGGLELGALLTNDGQEEYDFHEGENVFCRIQPEDINIVAS*