ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_59817_109

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: comp(114356..116359)

Top 3 Functional Annotations

Value Algorithm Source
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.2
  • Coverage: 674.0
  • Bit_score: 796
  • Evalue 2.50e-227
UvrD/REP helicase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4CU41_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 58.2
  • Coverage: 674.0
  • Bit_score: 796
  • Evalue 1.80e-227
UvrD/REP helicase similarity KEGG
DB: KEGG
  • Identity: 47.7
  • Coverage: 662.0
  • Bit_score: 611
  • Evalue 2.30e-172

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Chthoniobacter flavus → Chthoniobacter → Spartobacteria → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 2004
ATGAGCCGTTTCCGGTTTTTCGATCTCAATCCCGAGCAACAGGACGCCGCGAGTCACGAGCATGGCCCGCTCCTGATCCTGGCGGGCGCGGGAACCGGAAAAACGCGCACCATCACCGCGCGCATCGCGTGGCTGATTTCGCAGGGCGTCGATCCCGCGAAAATCATGGCCGTGACCTTTACGAACAAGGCCGCACGCGAAATGAAGGACCGTATCGCGGGCATGGTCGATCCCGACCAGGCCAAGGCCGTGACGGCCTCGACCTTTCACGCGCTCTGCGTGCGCATCCTGCGCGGCGATGCGCACCGGCTCGGCTACAAGAACAACTTCAGCATCTTCGACGAAGGCGACCAGACCGGCTTGATCAAGAAGGTCATCACCCGCGTCTGCGCGAAGGACGAGAAAATCGACCACAATCTCGCCAAGAGCCTCATCAGCAAGGCGAAGAACTCCGGCCTAAACGCCTCGACCGACGAGAACAGCCTCGCGGGAGCGGTTTATCGCCGTTACCAGGAGGAACTCCACTCGCTCAATGCGATGGATTTCGACGATCTGCTCGTGCAGGCGGTGAAGCTCATGGAGGAGCATGTCGAGGTGCGCGACAAATGGCGCGACCGCATCGAGCAACTGATGGTCGATGAGTTTCAGGACACGAACGGCCTCCAGCTTCGCATGGTCGGCCTGCTGGCCAGCGGCGATCCGCCGAATGTCTGCGTGGTGGGCGACGACGACCAGAGCATCTATGGATGGCGCGGTGCGGATGTGTCGAACATCCTCGAGTTTGAGCGGCACTTTCCGAATCCCAAGGTCATCCGCCTGGAGCAGAATTACCGCAGCACCAATGCCATCCTTGGCGCGGCTAACCGGCTCATTCGCAACAACCCGCGCCGCCGTGGCAAGAACCTCTGGAGCCCGCAGCAGGGAGGCGAGCCGGTGCGCATCATCGCCGTGCCGGATGATCGCAAGGAGGCGGAGTTTATCGTCGAGGAAATCGCCGCGCATCGCCGCAGCCAGAATCTCCCGTGGGAGCACTTTGCGATCATCTATCGCATGAACGCCCAGTCGCGCCTGCTGGAGGAGAACCTCCGCAAGCATAAGATCCCGTACCGCCTCGTGGGCGGAAAGAGCTTCTTCGAGCGGCGCGAGATCAAGGACATCATGGCGTACATGACGGCTCTGCTGAATCCCTCCGACGATCAGTCTCTGTTGCGCATCATCAATACCCCGCCGCGCGGAATCGGCGCGACGACGGTGGAGCTCGCGCTGTCGCACAGCGTGGAGCACCGGCAGAGCCTCTACGAGGCGCTGCGCCACGACTTGTTTCTGGAGACCTGCACGCGCAAGGCGGCGGATGCGATCAAGCGTTTCACCGACGAGCTGGAGGAAACGCGCATTCGAGTCTCCACGCCGGGCGCGCCGATTGCCGAGATCATCTCCACGCTGCTCGAGAATTGCGACTACATGGAGGACATGAAGCGCTCCTGCAAAACGCCCGACGAGGCGATGAATCGCGAGGAGAATGTGCGTGAGATGATTCGTGCGCTCGACGAGTACCAGAAGCGATCGAAGGACGGGCTGCAGGGTTATCTTGACGAGGTGAGCCTCGACCGCGAGCGCGAGGAGGACAGGGCGGAGACCGCGCTCGGCGTCACGCTCATCACCATGCACGCGGCGAAGGGTCTGGAGTTTCCCCATGTCCATCTCATCGGCGTGGAGGATGGATTCCTCCCACACGACCGATCCAAGGCCGAGGGCACCGTCGACGAAGAGCGGCGTCTCTTTTACGTCGGAATCACGCGGGCGATGAAATCGCTCATTATCACGTGGTGCCGCGCGCGGGTGAAATTTGGCAGCCCCATGCACTGCCTGCCGAGTCCGTTCCTGCAGGAGATCAAGGGCGAGCACGTCGAGGAGGAGACTTATGAGGAAATCATGAGCCGCCCGATGGGAGAGGAAGACATCATGGCGCAGTTTGCCAAGCTGCGCGCGCAGCTTTCCGGATAG
PROTEIN sequence
Length: 668
MSRFRFFDLNPEQQDAASHEHGPLLILAGAGTGKTRTITARIAWLISQGVDPAKIMAVTFTNKAAREMKDRIAGMVDPDQAKAVTASTFHALCVRILRGDAHRLGYKNNFSIFDEGDQTGLIKKVITRVCAKDEKIDHNLAKSLISKAKNSGLNASTDENSLAGAVYRRYQEELHSLNAMDFDDLLVQAVKLMEEHVEVRDKWRDRIEQLMVDEFQDTNGLQLRMVGLLASGDPPNVCVVGDDDQSIYGWRGADVSNILEFERHFPNPKVIRLEQNYRSTNAILGAANRLIRNNPRRRGKNLWSPQQGGEPVRIIAVPDDRKEAEFIVEEIAAHRRSQNLPWEHFAIIYRMNAQSRLLEENLRKHKIPYRLVGGKSFFERREIKDIMAYMTALLNPSDDQSLLRIINTPPRGIGATTVELALSHSVEHRQSLYEALRHDLFLETCTRKAADAIKRFTDELEETRIRVSTPGAPIAEIISTLLENCDYMEDMKRSCKTPDEAMNREENVREMIRALDEYQKRSKDGLQGYLDEVSLDREREEDRAETALGVTLITMHAAKGLEFPHVHLIGVEDGFLPHDRSKAEGTVDEERRLFYVGITRAMKSLIITWCRARVKFGSPMHCLPSPFLQEIKGEHVEEETYEEIMSRPMGEEDIMAQFAKLRAQLSG*