ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_59817_120

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: comp(129645..130394)

Top 3 Functional Annotations

Value Algorithm Source
Short-chain dehydrogenase/reductase SDR n=1 Tax=Burkholderia sp. RPE64 RepID=R4X1V6_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 67.5
  • Coverage: 249.0
  • Bit_score: 334
  • Evalue 9.20e-89
short-chain dehydrogenase/reductase SDR similarity KEGG
DB: KEGG
  • Identity: 67.5
  • Coverage: 249.0
  • Bit_score: 334
  • Evalue 2.60e-89
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:BAN26351.1}; TaxID=758793 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. RPE64.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.5
  • Coverage: 249.0
  • Bit_score: 334
  • Evalue 1.30e-88

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Burkholderia sp. RPE64 → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 750
ATGTCAAAACTCGACGGAAAAATCGCAGTGGTCACGGGCGGCAGCAGCGGCATTGGCCTCGCCATCGCGCAGAAGTTTGTGGAAGAGGGCGCGTATGTCTTCATCACCGGCCGGAGGCCGGCTGAACTCGACAAGGCCGTGGCTGCCATCGGCAAAAACGTCACCGCCGTGCAGAGCGATGTCGCAAAGCTGGAAGATCTCGACCGCCTCTATGAGCAGGTGAAAGCCGAGAAAGGTGCGCTGGACATCATCGTCGCCAATGCCGGAATTGCCGAGTTTGCTCCTCTGGGCGAGATAACGGTCGAGCACTATGACAAGATCTTCGACATCAATGTCCGGGGAGTTCTCTTCACCACGCAAAAGGCGCTGCCCCTCCTAAGGGATGGTGGGGCGATCGTGGTGGTGGCGTCCGTCGTGCAGTACCTCGGCTTCCCCGGGGCGACGGTGTATTCCGCCACCAAGGCGGCGGTACGTTCGTTTGTCCGGACCTGGGCGGCGGAGTTGAAGGGCCGCGGCATTCGCGTCAACAGCCTCAGCCCGGGGCCGATCGACACGCCGATCCTCGATGGGCAGCACAAGAGCAAGGAGGAGGCAGACGCCACGAAGGCCGGTCTTGCGCAGATGGTGCCCCTCGCCCGACTTGGACGTTCGGAGGAGATTGCCGCAGCGGCGTTGTTTCTCGCGTCGAGCGACAGCAGCTATTCCACCGGCATCGATCTGCTTTCCGACGGCGGCATGGCCGATATTTAA
PROTEIN sequence
Length: 250
MSKLDGKIAVVTGGSSGIGLAIAQKFVEEGAYVFITGRRPAELDKAVAAIGKNVTAVQSDVAKLEDLDRLYEQVKAEKGALDIIVANAGIAEFAPLGEITVEHYDKIFDINVRGVLFTTQKALPLLRDGGAIVVVASVVQYLGFPGATVYSATKAAVRSFVRTWAAELKGRGIRVNSLSPGPIDTPILDGQHKSKEEADATKAGLAQMVPLARLGRSEEIAAAALFLASSDSSYSTGIDLLSDGGMADI*