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berkeley_reactor_200306_planktonic_scaffold_59817_528

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: 598379..598990

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Verrucomicrobium sp. 3C RepID=UPI00036526C0 similarity UNIREF
DB: UNIREF100
  • Identity: 40.2
  • Coverage: 214.0
  • Bit_score: 146
  • Evalue 2.90e-32
Lipoate-protein ligase A-like protein {ECO:0000313|EMBL:CDD93097.1}; TaxID=1262691 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Akkermansiaceae; Akkermansia; environmental samples.;" source="Akkermansia sp. CAG:344.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.7
  • Coverage: 211.0
  • Bit_score: 144
  • Evalue 9.10e-32
Lipoate-protein ligase A-like protein similarity KEGG
DB: KEGG
  • Identity: 39.8
  • Coverage: 211.0
  • Bit_score: 139
  • Evalue 1.00e-30

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Taxonomy

Akkermansia sp. CAG:344 → Akkermansia → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 612
ATGGCGCTCGACGAGGCGCTCTTTGAACGCGCGAGCCGCCCGATCCTGCGCACCTACTGCTGGTCGGAGGAATGGGTCACCTTTGGTTTTTCTCAATCGCAATCTGCTGTGGCCAAGTCGGTTGGCGAAATTCCTCTCGTCCGTCGCTGGACAGGTGGCGGCATCGTCGAGCATCGGGGGGATTTCACTTTTGCCCTCATCGTGCCGAGGACAGACGCCTTTGCCAGAATCCGCCCGTGCGAGAGCTACCGGGTGATTCATCGGGCGATGGCCCGGGCGCTGGAGCACGCGGGTACGCCGGTGACGCTGGCCGGTCCCGTTCCGGCGGCTGCGCCGGGTGCGTGCTTTGCCGGAGCGCCAGCGGAAGCGGATCTGCTCGGCGAGGATGGCCTCAAGGTTTGCGGCGGAGCCCAGCGGCGCACCCAGCAGGGCATCCTTCACCAGGGCAGCCTCCAGCAAACGGAGATCCCGCAGGGACTTTCGAACGCGCTCGCTTTTCAACTGTCGGATCGTGTAGAAGAGTTTGTCCCCCAAACAGACTTGAACGACAGGGTATCGGAACTGATCTCGGCCAGATACGGCTCAGACGCCTGGAATCGGCGCATTCTGTGA
PROTEIN sequence
Length: 204
MALDEALFERASRPILRTYCWSEEWVTFGFSQSQSAVAKSVGEIPLVRRWTGGGIVEHRGDFTFALIVPRTDAFARIRPCESYRVIHRAMARALEHAGTPVTLAGPVPAAAPGACFAGAPAEADLLGEDGLKVCGGAQRRTQQGILHQGSLQQTEIPQGLSNALAFQLSDRVEEFVPQTDLNDRVSELISARYGSDAWNRRIL*