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berkeley_reactor_200306_planktonic_scaffold_59817_548

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: 621097..622206

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LacI family {ECO:0000313|EMBL:ACT94052.1}; EC=5.1.1.1 {ECO:0000313|EMBL:ACT94052.1};; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 28.7
  • Coverage: 335.0
  • Bit_score: 105
  • Evalue 1.10e-19
LacI family transcription regulator n=1 Tax=Dyadobacter beijingensis RepID=UPI00035C6DF8 similarity UNIREF
DB: UNIREF100
  • Identity: 29.0
  • Coverage: 335.0
  • Bit_score: 107
  • Evalue 1.60e-20
LacI family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 28.7
  • Coverage: 335.0
  • Bit_score: 105
  • Evalue 2.20e-20

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Taxonomy

Dyadobacter fermentans → Dyadobacter → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1110
ATGAGTTTGGATGGTCAAGAGAGCTTGCGGCCCTCGGAGCTGGTGCTGCGTCATATTGAGGGATTGCAGGCGAGCGTGCATGGGGAGACGCGGTTGCCCACGGTGCGGGAGATGGCGAGGCTGCTCGATGTCGGTGCGTCGACCGTGAGCGTGGTGTACCGGGCGCTGGCCAATCAGGGGCGCATTCGCACCGAGGTGGGCAACGGGAGTTTTCTTTTGCCGGTGGGCGGCGCGGAACCCAGGCCGGGCCGGGGCGGATTGGAGATCGGCATCGGGCTGGAACCCCACGATCTGGATGATCCGCAGGGGTGGCGGTCGCGGATTTATGGCGCGGTGACGGTTGCGGCCCTGCGCATCGGGCGGCATTCGACGCTGGTGCCCCTGTATGTGGATTCGCCCGATCTGGAGGATCAGGTGAAATCCCTCGATGCCGTGGTGATCATGCCGGGAAATCTCCTGCATCAGCCGCTCGTCGAGGCGGCGGACCGCAAGGGCATTCCCGTGGTGTACCTGAATCCCCCGAAGACGGGCTCGACCCGGAATTTTGTCTCCCCGGATTATGCGGGAGCGAGCGAGGAGCTGGGCCGGGCCTTTCTGGCCTCGGGGCGCAAGCGGGTGCTCGTCCTCCTCAGCGACCCATGGCCCCTGATGATTTCCTCCCACTACCGGGTGAGCGGACTGCTGACGGGATTGGATTACGGGAAGAGCGATGTGCAGTTTGACATCGCCGTGGCAAATGGCTTCACCGTGGAGGACGGGCGGCGCGCGCTCCGGAGCTTCCTGGAGTCTCATCCGGAACGGCCCGATGCGATCTATACCTCCGGCGACTTCCTCGCCATGGGATGTGTGGAGGAACTCGAGGCGCGGGGTATTTCCGTGCCGGATGAGGTGAGCGTGGTGGGCGGCTCAGGCTTGAACCTCGAGAAGTATTCCCATCCCCAGCTCACCTGCTGCGCGCAGCCTTACGAGGTGATGGGAGCGGAGCTGATCAAGATGATCCTCCGGCTCAGCGAAAACCCGGGGCAGGACGTGCCGGGCGTGGTGACGCCGATGACCTGGACCGGTGGAGCATCCACGACCGACGCGGAGAACCGGATTCTCCTAAAGTAA
PROTEIN sequence
Length: 370
MSLDGQESLRPSELVLRHIEGLQASVHGETRLPTVREMARLLDVGASTVSVVYRALANQGRIRTEVGNGSFLLPVGGAEPRPGRGGLEIGIGLEPHDLDDPQGWRSRIYGAVTVAALRIGRHSTLVPLYVDSPDLEDQVKSLDAVVIMPGNLLHQPLVEAADRKGIPVVYLNPPKTGSTRNFVSPDYAGASEELGRAFLASGRKRVLVLLSDPWPLMISSHYRVSGLLTGLDYGKSDVQFDIAVANGFTVEDGRRALRSFLESHPERPDAIYTSGDFLAMGCVEELEARGISVPDEVSVVGGSGLNLEKYSHPQLTCCAQPYEVMGAELIKMILRLSENPGQDVPGVVTPMTWTGGASTTDAENRILLK*