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berkeley_reactor_200306_planktonic_scaffold_151594_66

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: comp(81135..83039)

Top 3 Functional Annotations

Value Algorithm Source
primase, putative n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001745B6B similarity UNIREF
DB: UNIREF100
  • Identity: 39.5
  • Coverage: 602.0
  • Bit_score: 434
  • Evalue 1.70e-118
Phage/plasmid primase, P4 family, C-terminal domain {ECO:0000313|EMBL:EIQ01616.1}; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 33.9
  • Coverage: 679.0
  • Bit_score: 357
  • Evalue 3.60e-95
Hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 27.7
  • Coverage: 491.0
  • Bit_score: 137
  • Evalue 9.10e-30

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Taxonomy

Opitutaceae bacterium TAV1 → Opitutales → Opitutae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1905
ATGGAACTATCTAGTCAAGTCTCTGGAAACAAGGCAGTTGAAGATATTCTGGCGCTCTTGGGACAGGAAGCAGTTTTGCTTCCTGTCTCAAAAAGGGCAAAAGCCCCTAGCCTCCCGAATTGGAACAAGCTGGATCACTCCTGCATGCGCGATCCAGTTCATCTGGAATCGCTCACCCGTGGAAACATTGGCGTGCTTCTCGGAGCTCCCTCGGGAGGGCTTTGTACGATCGATGTCGACGACGACGATCAGGCAGAGGCGTTTCTTGCCCTCAATCCACAACTCCAGGCTACCCTACAAACGAGAGGATGTCGGGGCCGAAACTTCTGGGTGCGCATGGATGGGGAGTATCCAGCACTCACAAAGTTGGTCATTCTGGAAGGCACTGCCTGGGGAGAATTCCGCTCCACTGGAGGACAAACCGTCATCAGCGGAGAGCACCCGAAAGGCATGCCCTACCAATACATCTGCAAGCAACCTCCGGTCAGATTGCGCTTTGAAGAGCTGAATTGGCCTCAAAACCTCAAGCTACCCTGGATCAAAGATCCTTTTGAGGTGCTTTCTGAGAAAGAAGGGCCGTTGGTTGATATCCGGGCAAACGGAGCAACTCGCCTAAACAGTAAAGCCATGGCAGAGAAGTTGCTGATGGAGAATCACTTCGACTACGATCGACAGGAGAAGAATCTCTACCAATATGATCCCGAAAGAGGCGTCTACTCTGTAGCTGGCGAGGAATTGCTGGACTTCGTGTCCCAAGAAATCAAACGGGTTGCAGACGAGACAGGTAGAGAGGATCTGACGATCAATCGGAACAATCACCAAATTGCTTCCATTGTCGACTCCATGAGGGCAAAACTGGCCAGAACGAGGCTGAGCAACCCTGACGCAGTTGAAAATGCCATCGTTGTAAAGAACGGGGTGCTGGAACTGACGGCTGAAGGTGGCGTACTGACGACCTTTCATCCTCGGCACAGGAGTCGCAACCAAATTCCGATCGATTTCGATCCAGAGGCAAGGTGTAACCGCTTCTTGAACGAAGTTTTACGGCCCGTTCTGTCGGAAGACGATATTGAAGTCCTTCAAACATACATGGGAAGCGTCCTTCTAGGGCGAAACACGTCCCAGCGGATCCTCTTACTCTGTGGACCTGCGGGTAGCGGAAAATCTACGGTCGTGGAGATCATCGAGCGCCTAATTGGACTCGAGAATACGGCTGAGCTTCGCATGGATCATCTGGATGGACGGTTCGAGATGTATTCGGCTCGCAACGCGACCTTGTTGACAGGGAAGGATGTTCGCTCTGACTTCTTGGGAAAGAAGACCGCTAGCATGTTGAAGAAGCTGTCTGGGGGTGATGCCATCCGTGTCGAACAAAAGGGGGGCGCATCTTTTGATGTCGCCAAGCCCTTTCACATCATCATTACGGCAAATACCAAGCTGACGATAAACCTCGATGCAGATATTGATGCGTGGAATCGACGGCTTGTCCTGATCGAATTCCAGCCTGCGCGTAATCGGCCTGTTGTGCCTGAGTTTGCGCAGGTGCTGTTAAGGGAGGAGGCCTCGGGCATACTTGACTTCTTCGTGGAAGGAGCAAGAAAGTTTCTGGAACACGGGATCACCCTGTCCCAGGAACAGAAAGATAAGACCTACAATATGCTTCTGGAGTCGGATTCTATCCGATGCTTCGCTGAGACGGCGGTGGAATCAGCCGCTGATAAAGCCGTAAGTTCATCGGAACTGTATGCGCAATACTCGGAGTTTTGTGAGACCCGTAGTTGGGTTGCCCGCCCTAAGCCAGCCTTTTGTAAGGAGATAGCAGCGCATCTATTCGAGCTCTATGGAGCTCGCTGCTCGCATGACATCGGTACAAATCGGGGGTATCGAGGAATAGGAGTTAAATAA
PROTEIN sequence
Length: 635
MELSSQVSGNKAVEDILALLGQEAVLLPVSKRAKAPSLPNWNKLDHSCMRDPVHLESLTRGNIGVLLGAPSGGLCTIDVDDDDQAEAFLALNPQLQATLQTRGCRGRNFWVRMDGEYPALTKLVILEGTAWGEFRSTGGQTVISGEHPKGMPYQYICKQPPVRLRFEELNWPQNLKLPWIKDPFEVLSEKEGPLVDIRANGATRLNSKAMAEKLLMENHFDYDRQEKNLYQYDPERGVYSVAGEELLDFVSQEIKRVADETGREDLTINRNNHQIASIVDSMRAKLARTRLSNPDAVENAIVVKNGVLELTAEGGVLTTFHPRHRSRNQIPIDFDPEARCNRFLNEVLRPVLSEDDIEVLQTYMGSVLLGRNTSQRILLLCGPAGSGKSTVVEIIERLIGLENTAELRMDHLDGRFEMYSARNATLLTGKDVRSDFLGKKTASMLKKLSGGDAIRVEQKGGASFDVAKPFHIIITANTKLTINLDADIDAWNRRLVLIEFQPARNRPVVPEFAQVLLREEASGILDFFVEGARKFLEHGITLSQEQKDKTYNMLLESDSIRCFAETAVESAADKAVSSSELYAQYSEFCETRSWVARPKPAFCKEIAAHLFELYGARCSHDIGTNRGYRGIGVK*