ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_151594_136

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: comp(151081..152211)

Top 3 Functional Annotations

Value Algorithm Source
Alanine racemase n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D6I5_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 334.0
  • Bit_score: 322
  • Evalue 5.50e-85
alanine racemase similarity KEGG
DB: KEGG
  • Identity: 44.5
  • Coverage: 375.0
  • Bit_score: 276
  • Evalue 5.70e-72
Tax=RIFCSPHIGHO2_12_FULL_Verrucumicrobia_41_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 47.3
  • Coverage: 366.0
  • Bit_score: 329
  • Evalue 3.70e-87

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RHI_Verrucumicrobia_41_10 → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1131
GTGTCCATTCCTTCGAACCTCCGTACCTGGGTTCAAATCGATCTCGCCGCCTTCCGGCACAATCTGAAGGCCATTCGCGCGCGGATCGGCCCGGTCGCCGGGATCATCGCCGTGGTGAAAGCCGATGCCTACGGGCATGGCATCACGCGAGTCGCCCCGGCCATCGCGGATCAAGTGGATCTTTTTGCCGTGGCCAACGTGCATGAGGCGGACGAACTCGCCGCCCTGGGCTTGGGCCGCGAAATCCTTCTTCTCGGTCCCTGCCTGCCCGATGAACGTCAGGCGGCGGTGGATGCCGGGTATATCGTTTCGGTTTCCAGCGCCGAGGAGGCGGCTGCGGTGGCTGCGTTGTCGGGGAACCGCCCATGCGCGCTCAATCTCAAGGTCGATACCGGCATGGGGCGCATGGGGTGCTGGCATGAGGACGCCGTGGAGGTCGTGCGTCAGATCGTGAAGCTCCCGAACCTCGGAGCGTTTCATATTTCGACCCACCTCCCTGCGCCGGATGAGGATGCGGCTTTTACGCGGGAGGAGCTGGTGGGCTTCGGGCGGCTCGCGGCGGCAATCAAAGCCATCGCGCCGAAGGCGAAATTCCACGCCCTCAACAGCGCGGGCATCTTTGAGTTCGCCGGGTTCGCTCCGGATTACGTGCGGGCGGGGCTTGTGCTCTACGGCTCGTGTTACCCCGATATCTACCAGCCGCAAATCCAGCCTGCGCTGAGTTGGAAAGCCCGGATCGTGCTCGTGCGCGATGTCCCGGCAGGGCGGAGTGTGAGCTACGGGCGCACGTTCTTTACCCCCCACCAGATGCGTATCGCCACGGTGCCGGTGGGCTATGCCGATGGGTTTCCGCGACAGGTTTCCGGACATGACGCGGCGGTGCTTGTCCATGGGCGGCGCTGCCTGGTGCTGGGCCGGGTGACGATGGACCAGATCCTCGTCGACGTCACCGACGTGCCGGAGGCTCAGGTGGGAGATGAGGCGGTGTTGATCGGACGGCAGGGCGGGGAGGAAATCCTCGCCCGGGAGCTGGCCGACAAGGCGGGAACGATCTCCTGGCACATTTTTACCGGCTTGAAGCCGCGCGGATCGTACTTTTATTACGATTCCGACACAGGCTCGACAGTGTAG
PROTEIN sequence
Length: 377
VSIPSNLRTWVQIDLAAFRHNLKAIRARIGPVAGIIAVVKADAYGHGITRVAPAIADQVDLFAVANVHEADELAALGLGREILLLGPCLPDERQAAVDAGYIVSVSSAEEAAAVAALSGNRPCALNLKVDTGMGRMGCWHEDAVEVVRQIVKLPNLGAFHISTHLPAPDEDAAFTREELVGFGRLAAAIKAIAPKAKFHALNSAGIFEFAGFAPDYVRAGLVLYGSCYPDIYQPQIQPALSWKARIVLVRDVPAGRSVSYGRTFFTPHQMRIATVPVGYADGFPRQVSGHDAAVLVHGRRCLVLGRVTMDQILVDVTDVPEAQVGDEAVLIGRQGGEEILARELADKAGTISWHIFTGLKPRGSYFYYDSDTGSTV*