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berkeley_reactor_200306_planktonic_scaffold_202757_102

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: comp(146518..148032)

Top 3 Functional Annotations

Value Algorithm Source
L-arabinose isomerase {ECO:0000256|HAMAP-Rule:MF_00519, ECO:0000256|SAAS:SAAS00008909}; EC=5.3.1.4 {ECO:0000256|HAMAP-Rule:MF_00519, ECO:0000256|SAAS:SAAS00008909};; TaxID=1263870 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula sallentina SM41.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 78.2
  • Coverage: 504.0
  • Bit_score: 849
  • Evalue 2.40e-243
L-arabinose isomerase (EC:5.3.1.4) similarity KEGG
DB: KEGG
  • Identity: 66.2
  • Coverage: 503.0
  • Bit_score: 713
  • Evalue 2.50e-203
L-arabinose isomerase n=1 Tax=Rhodopirellula sallentina SM41 RepID=M5U736_9PLAN similarity UNIREF
DB: UNIREF100
  • Identity: 78.2
  • Coverage: 504.0
  • Bit_score: 849
  • Evalue 1.70e-243

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Taxonomy

Rhodopirellula sallentina → Rhodopirellula → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1515
ATGAAAAACATCCCCGATCCCGAAATCTGGTTCATCACAGGCAGTCAGCATCTTTACGGGGAAGGCCCGCTCCGACAGGTGGCGTCAAACTCCGAATCCATCATCAAGGAGCTGAATGCCACGAAGCGCCTGCCGCTGAAGCTTGTCTTCAAACCCGTGCTGACGAGGCCCGAGGAAATCCGGGCTCTTTGTCTGGAGGCCAACAGTGCCCCCCGTTGCGCCGGACTGGTGATCTGGTGCCACACTTTCTCGCCGTCCAAAATGTGGATCAATGGTCTGCTCCAGTTGCGCAAGCCGGTGCTGCATCTTTCCACCCAGTTCAATCGTGAGCTGCCATGGGAGACCATCGACATGGACTTCATGAACCTCAATCAGGCTGCTCATGGCGACCGCGAGCACGGCTTCATACACTCCAGGCTGAGGCTCCCCCGCAAGGTGGTCGTGGGCCACTGGAGCGACACGGAGGTGCAGGATCGGGTGGCTGCATGGATGCGGGTCACGCGCGCATGGGCCGACTGGCAGGGCGGCAGGTTTGTCCGGTTCGGGGATAACATGCGCTTCGTCGCCGTCACCGAGGGCGACAAGGTCGCCGCCGAGGCAAAGTTTGGATTCTCGGTAAACACGCATGGAATCGGAGACCTGACGGAGGCACTGGACCATGTCGACGACGAATCGATCACCCGGCTTTGCCGCGAATATGAAGAACTTTATCACGTCACCCCGACGCTGAGAAAGGGAGGCGACCGCCATGAAACGCTACGCTATAACGCGCGGCAGGAACTCGGTCTGCGCGCCTTCCTGGAGGCGGGCAGCTTTCTTGGGTTTAGCGACACGTTCGAGGATCTGCACGGTCTCCATCAACTCCCGGGCCTGGCCGTACAGCGCCTCATGGCCGAGGGATACGGCTTTGCCGGAGAGGGTGACTGGAAGACTGCGGCTCTCGTGCGGGCCATGAAAGTCATCTCGGCCGATCTGCCGGGCGGCACGTCCTTCATGGAGGACTACACGTATGAGCTCAACCCGGAGAACCAACTCGTCCTTGGCTCTCATATGCTGGAGATCTGCCCATCCATAGCGGCCGCCCGTCCCGCCATCGAAATCCATCCCCTCGGCATCGGCGGCAAGGCCGACCCGGCGCGATTTGTCTTCGACGCACATCCCGGCGCGGCGATCAACGTTGCGATGATGGATCTCGGAAATCGTTTCCGGCTGTTGGTCAATGAAGTGGATGTCATCGCTCCACCCCGCCCTCTCCCCAGATTGCCGGTGGCGCGGGCCGTATGGAAATGCCGACCCAGCCTCAAGACCGCGGTCGCGGCATGGATCTATGCAGGTGGGACGCATCATACCGGCTTCAGCTACGCGGTCACCACCGAACACGTCGAGGACCTCGCCGAGATTGCGGGCGTGGAGGTTGCCATCATCGATGGTGGCACCGAAATCCGGTCATTCCGCCAGCAGCTCCGCAATGACGAAATCTACTACCATGTCGCTCCCGGCCTCAGCCGACTTTAG
PROTEIN sequence
Length: 505
MKNIPDPEIWFITGSQHLYGEGPLRQVASNSESIIKELNATKRLPLKLVFKPVLTRPEEIRALCLEANSAPRCAGLVIWCHTFSPSKMWINGLLQLRKPVLHLSTQFNRELPWETIDMDFMNLNQAAHGDREHGFIHSRLRLPRKVVVGHWSDTEVQDRVAAWMRVTRAWADWQGGRFVRFGDNMRFVAVTEGDKVAAEAKFGFSVNTHGIGDLTEALDHVDDESITRLCREYEELYHVTPTLRKGGDRHETLRYNARQELGLRAFLEAGSFLGFSDTFEDLHGLHQLPGLAVQRLMAEGYGFAGEGDWKTAALVRAMKVISADLPGGTSFMEDYTYELNPENQLVLGSHMLEICPSIAAARPAIEIHPLGIGGKADPARFVFDAHPGAAINVAMMDLGNRFRLLVNEVDVIAPPRPLPRLPVARAVWKCRPSLKTAVAAWIYAGGTHHTGFSYAVTTEHVEDLAEIAGVEVAIIDGGTEIRSFRQQLRNDEIYYHVAPGLSRL*