ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_202757_103

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: comp(148066..149751)

Top 3 Functional Annotations

Value Algorithm Source
Ribulokinase {ECO:0000256|SAAS:SAAS00183333}; EC=2.7.1.16 {ECO:0000256|SAAS:SAAS00183333};; TaxID=1263870 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula sallentina SM41.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.8
  • Coverage: 550.0
  • Bit_score: 850
  • Evalue 9.30e-244
L-ribulokinase n=1 Tax=Rhodopirellula sallentina SM41 RepID=M5U7J5_9PLAN similarity UNIREF
DB: UNIREF100
  • Identity: 73.8
  • Coverage: 550.0
  • Bit_score: 850
  • Evalue 6.60e-244
carbohydrate kinase FGGY similarity KEGG
DB: KEGG
  • Identity: 69.9
  • Coverage: 551.0
  • Bit_score: 794
  • Evalue 1.60e-227

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Rhodopirellula sallentina → Rhodopirellula → Planctomycetales → Planctomycetia → Planctomycetes → Bacteria

Sequences

DNA sequence
Length: 1686
ATGAAGGGTGCGGCCATCACGATGTCATTTACCCTCGGACTTGATTACGGAACGAACTCCGTCCGCGCACTGGTGGTCGAAACCGCCACCGGGCGCGAGATCGGCATCGGCATCTTTGACTATCCAAGCGGCACCCAGGGAGTCATCCTCGACCCGCGCGATCACCACTTCGCCCGGCAGCATCCGGGAGACTACCTGACCGGTCTCGAGACATCCGTGAAACGGGCCTTGGACGAGGCGGAGAAGACCCCCGGGTTCTCCCGGGGGAAGGTGATGGGCATCGGGGTCGACGCGACAGGCTCGAGTCCCCTGCCGGTCGACGAAAACAATGTCCCGCTGGCGCTCCACCCCCGGTGGAAGGATGCCCCTGCCGCGCAGTGCTGGCTCTGGAAAGATCATACGAGCCATGGCGAGGCAGTGGAGATCACACAACTGGCGGCAGAGATGCGGCCCCGATACATCGCAAAATGCGGTAATACCTACTCCTCCGAGTGGTGGTGGAGCAAAATCTGGAAATGCCTGAAGGATGCACCCGAGGTCTTCCATGCCGCCTACAGCTGGGTGGAGATCTGCGATTTCATACCGTCCGTGCTGGCGGGAGTGAACGATCCCCGGCGTATCATCCGGGGGATCTGCGCAGCCGGCCACAAGGCGCTCTACAGCGCGGACTGGGGCGGGTTGCCCGACAAGGAGTTTCTCGCCCGGCTTGCTCCCGAGCTGGCCGCGCTACGGGATCGTCTCTACGACACGGCCCGCGACGCGACTGTCCCGGCAGGTTTCCTCTGCCAGGAGTGGGCGGATACACTCGGATTGTCACAAGGAATCCCGATTGCAATCGGAGAGCTCGATGTCCACTACGGGGCGATAGCGTGCGGCATTGACGAGGGCACCCTCGTCAAAGTGATCGGCACCTCGACCTGCGACTGTGCGATCGTCCATGCCAGCAAGCCGGTCGAGGACATCCCGGGCATCTGCGGCATAGTCCCGGGAGCAATCCTCCCGGGCTATTACGGCATCGAGGCTGGTCAAAGCGCAGTGGGCGACATTTTCAAGTGGTGGGTCGAGCGCGTCTGCAACGGGCATCCCTCCCTCCATGCGGAGCTTACCGAAGCTGCCGCGGCGTTGTCTCCCGGTCAAAGCGGGCTGCTTGCCCTCGATTGGAACAATGGGAACCGGACGATCCTTGTCGATCCCATGCTCAGTGGACTGATCCTCGGCCAGACCCTTCACACGACGAGAGCCGAGATTTATCGCGCCCTCATCGAGGCGACAGCCTTTGGCGCCCGCGCGATCATCGAGCGCCTGCGGGAGTATGGAGTACCCATCACCCGGGTGATTTGCGCCGGGGGCATCGCGGAGAAGAATCCCCTGCTCATGCAGATATATGCGGACATCACAGGCTGCACGATGATGATGAGCAACTCCGTCCAGACATGTGCGCTGGGGAGTGCGATCTCCGCCGCGGTGGCGGCCGGAGCGCACCCCGATTTCCGCTCCGCTCAAGCCGCCATGACTTCGCTGAAGACCACGAGTTACTCTCCTGCGCCATCGAGTCAGGCGACCTATGACGAGCTTTATCGTCTTTACCGCATGCTGCACGACGCCTTCGGCGGGGTAAACAAGTCGGCGGATTTGTCCACGGTCATGAAACGCCTCATCGCCATCAAGGCCGGGGCAAATCGCTGA
PROTEIN sequence
Length: 562
MKGAAITMSFTLGLDYGTNSVRALVVETATGREIGIGIFDYPSGTQGVILDPRDHHFARQHPGDYLTGLETSVKRALDEAEKTPGFSRGKVMGIGVDATGSSPLPVDENNVPLALHPRWKDAPAAQCWLWKDHTSHGEAVEITQLAAEMRPRYIAKCGNTYSSEWWWSKIWKCLKDAPEVFHAAYSWVEICDFIPSVLAGVNDPRRIIRGICAAGHKALYSADWGGLPDKEFLARLAPELAALRDRLYDTARDATVPAGFLCQEWADTLGLSQGIPIAIGELDVHYGAIACGIDEGTLVKVIGTSTCDCAIVHASKPVEDIPGICGIVPGAILPGYYGIEAGQSAVGDIFKWWVERVCNGHPSLHAELTEAAAALSPGQSGLLALDWNNGNRTILVDPMLSGLILGQTLHTTRAEIYRALIEATAFGARAIIERLREYGVPITRVICAGGIAEKNPLLMQIYADITGCTMMMSNSVQTCALGSAISAAVAAGAHPDFRSAQAAMTSLKTTSYSPAPSSQATYDELYRLYRMLHDAFGGVNKSADLSTVMKRLIAIKAGANR*