ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_202757_112

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: 160710..161318

Top 3 Functional Annotations

Value Algorithm Source
Prepilin-type N-terminal cleavage/methylation domain-containing protein n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6AU99_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 35.8
  • Coverage: 218.0
  • Bit_score: 126
  • Evalue 1.80e-26
Prepilin-type N-terminal cleavage/methylation domain-containing protein {ECO:0000313|EMBL:EIP98590.1}; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 35.8
  • Coverage: 218.0
  • Bit_score: 126
  • Evalue 2.50e-26
type II secretion protein similarity KEGG
DB: KEGG
  • Identity: 34.4
  • Coverage: 218.0
  • Bit_score: 107
  • Evalue 2.50e-21

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Opitutaceae bacterium TAV1 → Opitutales → Opitutae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 609
ATGAATCCTCAATCAGCCGGCCGCCGGGCATTCACCCTTATCGAGATGCTGATCACCGTCGCCGTCCTGGGGGTTCTCGCCGCGCTTCTTTTTCCCATGGCCTCGCGAAGCGTAACATCCGCCCGGGCCGCACAGTCGCTGGCCAACCTCAAGAGCATCGGAACTGTGATGCACTTGTACGCGGGCGACAATAATGGCGCCTTCCCGTTGGTCTGGGATAGCGCGACCTCGACCTCCTGGATCGCGACGATCTGGCCATATGCCTCGGATCGCCGCTTCCCCGGCACCACGCCCAACGCTCTCAAGGGTAGTATCTTTTACACTCCGCTGGCCGAGAACGGCACCACCGCACGGACCTATGGGATGAACGAACCCTTGCAGTTGAAATACCCATCCCGGATGTATCTCTCCACCGTCCCCACGCCGTCCAAAGTCTCGCTGGTGGGCGATGTCAAAACCAGTGGCAGCTTCCGCCCGGATCAGGTCAACTATCGCAACAATGGCCTCGCACACGTCCTCTATATCGACGGCCATACCGGAGCTGTCGGTCCATCCGATGTCCCCGTGAATACGGTGTCCGTCTTTTGGACCGGAGTTCAATCCAACTGA
PROTEIN sequence
Length: 203
MNPQSAGRRAFTLIEMLITVAVLGVLAALLFPMASRSVTSARAAQSLANLKSIGTVMHLYAGDNNGAFPLVWDSATSTSWIATIWPYASDRRFPGTTPNALKGSIFYTPLAENGTTARTYGMNEPLQLKYPSRMYLSTVPTPSKVSLVGDVKTSGSFRPDQVNYRNNGLAHVLYIDGHTGAVGPSDVPVNTVSVFWTGVQSN*