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berkeley_reactor_200306_planktonic_scaffold_333344_23

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: 21311..22141

Top 3 Functional Annotations

Value Algorithm Source
Probable DNA repair protein CfE428DRAFT_4308 n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D5W9_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 71.7
  • Coverage: 269.0
  • Bit_score: 395
  • Evalue 3.70e-107
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 71.7
  • Coverage: 269.0
  • Bit_score: 395
  • Evalue 5.20e-107
Ku domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 57.5
  • Coverage: 280.0
  • Bit_score: 320
  • Evalue 3.30e-85

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Taxonomy

Chthoniobacter flavus → Chthoniobacter → Spartobacteria → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 831
ATGAGAACGCTTTGGAAAGGAGCCATCACCTTTGGACTCGTGTCGATCCCTGTGTCGCTCTACCCGGCGACCCGTCGGGAGGAACTTCGGTTTCGCATGTTGCGGAAGGCGGACCTGAGTCCTGTGACCTTCAAGCGAGTGGCTGAGAGTGATGGAAAGGAGGTCCCATGGGACCAAATCGTCAAGGGATACGAGTACGAGAAGGGGAAGTTTGTCGTGCTCAAGGAGGAGGACTTTGCCCGGGTGGATGTCGAGGCGACTCAGACTGTCGACATCATGAATTTTGTCCGAATGGATGAGGTCGACCCACTTCTCTTCTACAAGCCGTATTACCTGGAGGTGGGCAAGGGAGGGGACAAAGCCTATGTGCTCCTTCGGGAGGCCATGGAAAAATCGGGCAAAATCGCCATTGCAAAAGTCGTCATCCGGGTCAGGCAGCATCTCGCCGCGATCAAGCCGCAGAAGGAGGGATTGATCCTGGAACTCATGCATTTCCCCGACGAGCTTACGGACATCTCAAAATTCGCCGAGCCGCAGGAGCGAAACATTGTCGCTGCGGAGATGAAGATGGCGCAGCAGCTCATCGATAGCATGAGTGCAAAATGGGATCCATCGGAGTACGTCGATGACTATCGGACCGCGCTGGAAAAGATGATCGAGGAGAAGGTCGAGAAAGGTGATAGCGCGAAACCTGCGAAGGCCCGCCGCCGACATCCGGAGAATGTCATCGATTTGGTCTCGGTCCTGAAGAAAAGCATCGAGGAGACGAGCGCGGGAAAGACCGCGAAGAAGCGGACTGGCAAAGGGAAGCCGCGTCGCAAAGCTGCGTAG
PROTEIN sequence
Length: 277
MRTLWKGAITFGLVSIPVSLYPATRREELRFRMLRKADLSPVTFKRVAESDGKEVPWDQIVKGYEYEKGKFVVLKEEDFARVDVEATQTVDIMNFVRMDEVDPLLFYKPYYLEVGKGGDKAYVLLREAMEKSGKIAIAKVVIRVRQHLAAIKPQKEGLILELMHFPDELTDISKFAEPQERNIVAAEMKMAQQLIDSMSAKWDPSEYVDDYRTALEKMIEEKVEKGDSAKPAKARRRHPENVIDLVSVLKKSIEETSAGKTAKKRTGKGKPRRKAA*