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berkeley_reactor_200306_planktonic_scaffold_333344_90

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: 94615..95007

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001746A6E similarity UNIREF
DB: UNIREF100
  • Identity: 53.4
  • Coverage: 116.0
  • Bit_score: 133
  • Evalue 9.60e-29
Pilin {ECO:0000313|EMBL:AFX67140.1}; TaxID=1260177 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Corallococcus sp. 159B02.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 30.5
  • Coverage: 128.0
  • Bit_score: 61
  • Evalue 8.50e-07
pilA; pilin similarity KEGG
DB: KEGG
  • Identity: 31.2
  • Coverage: 109.0
  • Bit_score: 55
  • Evalue 9.40e-06

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Taxonomy

Corallococcus sp. 159B02 → Corallococcus → Myxococcales → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 393
ATGAATTTTCAGATCCGTCATCGCGGGTTTTCGCTCGTCGAGGTGCTGGCTGCTGTCGCCATCATCGGGATCATTACATTTCTCGCCATCCCCAATCTGATTCGCATCAAGGAGGACAGCGAAAAAAACCTCGCCATGGCACGAGCCGAGAGCCTGAACATGGCGATGGCGACCTATGTGCAGGCAGCCGGACAGTCTGCTGCGACCGCAAACTGGACCGGTGCAACCACAGATGACCAGCGGTACAGCCAGCTTGCGCCGTATCTGGCATTTGCTCCCGATACCTTGGAGAACTATATGCCGCATGGCTATAACGTTACCTTCCCTGCCACATTGGTGCCGCTTTCCAAGGCGACGCTGAAAGGTCCGGGCAACGCGGCTATCGCCTATTAG
PROTEIN sequence
Length: 131
MNFQIRHRGFSLVEVLAAVAIIGIITFLAIPNLIRIKEDSEKNLAMARAESLNMAMATYVQAAGQSAATANWTGATTDDQRYSQLAPYLAFAPDTLENYMPHGYNVTFPATLVPLSKATLKGPGNAAIAY*