ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_333344_366

Organism: 2019_SCN_bioreactor_200211_planktonic_Verrucomicrobia_60_20

near complete RP 47 / 55 MC: 1 BSCG 48 / 51 ASCG 15 / 38
Location: comp(412761..414587)

Top 3 Functional Annotations

Value Algorithm Source
ATP-dependent DNA helicase RecQ n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6AZ05_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 69.4
  • Coverage: 611.0
  • Bit_score: 874
  • Evalue 6.00e-251
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:EIQ00247.1}; TaxID=278956 species="Bacteria; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae.;" source="Opitutaceae bacterium TAV1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.4
  • Coverage: 611.0
  • Bit_score: 874
  • Evalue 8.50e-251
ATP-dependent DNA helicase RecQ similarity KEGG
DB: KEGG
  • Identity: 69.1
  • Coverage: 611.0
  • Bit_score: 869
  • Evalue 5.50e-250

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Opitutaceae bacterium TAV1 → Opitutales → Opitutae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 1827
ATGCCCAGCCTCGAAGACACGCTCCATCGCACGTTCGGCTATTCCTCGTTTCGGCCGCTCCAACGTGAGATCATGGAAGCCTCGCTGGCGGGCCGTGATGTCTTTGCCCTCCTCCCGACTGGTGGCGGCAAATCGCTGTGCTTCCAGCTCCCCGCCCTCATTCGACCCGGCCTGACCGTCGTGGTCTCACCGCTCATTGCCTTGATGAAGGATCAGGTCGACCAGCTCCAGGCAGCCGGTGTTTCCGCCACGTTCCTGAATTCCACCCTCGGAGCTGCCGAGTCGAAGAACCGCCTGCGTGGACTGCACAACGGCGAGTACCGCCTGCTTTATGTCGCCCCAGAGCGCCTGATGCTCGACAACTGGCGGGACAATCTTCTCTCCTGGAACGTATCCGCCCTCGCCATCGACGAGGCGCATTGTATTTCGGAATGGGGTCACGATTTCCGTCCCGAGTACCGCCAGATCGCGAAGCTCCGCGATCTCCTGCCCGACATCCCGGTCACGGCTCTCACTGCCACGGCGACGGAACGTGTGCGAGACGACATCGTCAAGCACCTGAAGCTACGCGATCCCGAGGTCTTCGTAGCCAGCTTCAACCGCCCCAACCTTCTTTATCGCGTCATCGCCAAAGACCAGCCGGCAAAGCAGATCGCGGATTTCGTTTCCAGTCGCCGCGAGGAAAGCGGCATCGTCTACTGCGCCACACGGGCCACCACCGAGCGCGTGGCTGAGGCACTATCCAATCGCGGCCTGACCGCCCGCCCCTACCACGCAGGCCTCTCCGCCGAGGAGCGCGCGCTTAACCAGGAGCTCTTTCTCCGGGACGAGGTGCGCATCATCTGCGCCACCATTGCCTTCGGGATGGGTATCAACAAACCCAACGTCCGCTGGGTCCTGCACTACGATCTGCCCAAAAACGTCGAGGGCTACTATCAGGAAACCGGGCGTGCCGGGCGCGACAGTCTACCCTCGGATTGTCTGCTGCTTTTCAGTCCCGGCGACGCGGCCAAGCAGATGCATTTCATCGATGAAATGACTGATCCCAGGGAGAAGCAGATCGCCCGCGACCAGCTCCGCCAGATGCTCGAGTACGCCGAGACGTCGCACTGCCGCCGTCAGTCGCTCCTGCGGTACTTTGGCGAAGACGTCGATGAGACAAACTGCGAGGGATGTGACAACTGTCTTGAACCTCGCGAAACCTACGATGGCACCATCCCGGCCCAGAAGTTTCTCTCCTGCATCCTTCGTATCCGCAAGGCCACTCCCTTCGGCGTAGGCATGAATCATATCATCGAAGTCCTCACCGGTGCGGAAACCGAGAAGGTTCGCAAATGGGGGCACAATACCCTCAGCACCTATGGCATCGGGAAGGATCTGCCCCGCCCAGAATGGGCGGCCATCGGCCGCGAGCTTCTTCGCCTTGGATTCGTCCAGCAGACTCCCGGCGAGTATCCTCAATGGGAAATCACCGAGGAGGGACTGGAAGTATTGAAATCGCGACGCATGATCTCGCTCACGAAGCCGCTGGCTTCACCCAGGAAGCGGGCCCGCAGCCGCTCGGGCGAGATTTCCTGCGACGAACTCCTCTTTACCCGCCTGCGCTCCGTCCGTAAACAGCTCGCCGACAAGCATCAGGTGCCTGCATACATCATTTTTGGCGATGCAACCCTGCGGGAAATGGCACGGAAATACCCGACCAGCGAGCAGGAAATGGCGCTCATCCCCGGCGTGGGAGAGAAAAAACTGGCCGAATATGGTGAAATTTTTTGCGATGCCATCTCGGAACACCTGTCGGTCTACCCAAAACTTGCGCAACCAGCGTAA
PROTEIN sequence
Length: 609
MPSLEDTLHRTFGYSSFRPLQREIMEASLAGRDVFALLPTGGGKSLCFQLPALIRPGLTVVVSPLIALMKDQVDQLQAAGVSATFLNSTLGAAESKNRLRGLHNGEYRLLYVAPERLMLDNWRDNLLSWNVSALAIDEAHCISEWGHDFRPEYRQIAKLRDLLPDIPVTALTATATERVRDDIVKHLKLRDPEVFVASFNRPNLLYRVIAKDQPAKQIADFVSSRREESGIVYCATRATTERVAEALSNRGLTARPYHAGLSAEERALNQELFLRDEVRIICATIAFGMGINKPNVRWVLHYDLPKNVEGYYQETGRAGRDSLPSDCLLLFSPGDAAKQMHFIDEMTDPREKQIARDQLRQMLEYAETSHCRRQSLLRYFGEDVDETNCEGCDNCLEPRETYDGTIPAQKFLSCILRIRKATPFGVGMNHIIEVLTGAETEKVRKWGHNTLSTYGIGKDLPRPEWAAIGRELLRLGFVQQTPGEYPQWEITEEGLEVLKSRRMISLTKPLASPRKRARSRSGEISCDELLFTRLRSVRKQLADKHQVPAYIIFGDATLREMARKYPTSEQEMALIPGVGEKKLAEYGEIFCDAISEHLSVYPKLAQPA*