ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_4342_125

Organism: 2019_SCN_bioreactor_200211_planktonic_Micrococcales_71_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 134124..135191

Top 3 Functional Annotations

Value Algorithm Source
Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E6Q2_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 80.3
  • Coverage: 355.0
  • Bit_score: 546
  • Evalue 1.70e-152
Periplasmic binding protein/LacI transcriptional regulator {ECO:0000313|EMBL:EIC07338.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.3
  • Coverage: 355.0
  • Bit_score: 546
  • Evalue 2.40e-152
LacI family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 56.1
  • Coverage: 353.0
  • Bit_score: 380
  • Evalue 3.50e-103

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium laevaniformans → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1068
GTGGTCAGGAAACGGGTGACCCTGTCGCAGGTCGCACAGGAGGCGGGGGTCGCGGCATCCACGGCCTCGCTCGTGCTGGCGGGCCGCGCCGACGAGCTGCGCATCTCCGCCACGGCGCAGGAGCGCGTGCGCGAGGCGGCCCGCCGGCTCGGGTACCGGCCGAACGCGCTGTCGGCCGGCCTGCGCACCGGCTCCACGCGCACGCTCGGCTTCGTCTCGGACTCGGTCGCGTCGTCGCAGCTGGCCGGCGAGATGATCCGCGGCGCCATCGAGGCCGCCCGCGCCCGGGGCTACATGGTCTTCGTCGGCGAGACGGGCGGCGACGGCCAGCTCGAACGCGACCTGCTCGACGCGATGTTCGACCGCCAGGTCGACGGCATCGTGCTCGCCACCATGCTCACCCACGCCCGCACGATCCCCACCGCCGCGACGCGGATGCCGACGGTGCTGCTCAACATCGAACCCGACGGCGGCACCGATCTCGTGCAGGTGCTGCCCGACGAGTACCGCGCCGGCCGCGAGGCGGCGCGGCTGCTGGTCGACACGGGCCACCGCCGCATCCACCTCATCGGCGTCGGGGACGACCCGGCGCACGCGCACCCGTTCGCCCTCGCCGCCGCGCAGCGCCTGCGCGGCGTGCTGGACGTGCTGGCCGAGGAGGGGCTGCGCGTGGCATCCGCTCAGCCCGCCGGCCAGTGGCTGCCGCCCGAGGGCTTCCGCCTGACCACGGCGCTCGTCGAACGGGGCGAGCCCGCCGACGCCCTGCTGTGCTTCAACGACAGGCTCGCGATGGGCGCATACCAGGCGCTGCAGGAGGCCGGGGTACGGGTGCCCGACGACGTGTCGGTGCTGTCGTTCGACGACACCCCGTTCGCGCGCTGGCTGCGACCCGGGCTCACGACGTTCGCGTTCCCGCAGCGGGCGCTCGGCCGGCGGGCGACCGACGAGCTCATCGACCTGATCGAGCGCGCCCGCGAGGACGGGGACGAGGCCGGGGGCCCCGGTGGGGCCGTGCACCTGATCCCGCTGCCGCTGCGCACGCGCGAGTCGGTCGCCGAGCGCGGCTGA
PROTEIN sequence
Length: 356
VVRKRVTLSQVAQEAGVAASTASLVLAGRADELRISATAQERVREAARRLGYRPNALSAGLRTGSTRTLGFVSDSVASSQLAGEMIRGAIEAARARGYMVFVGETGGDGQLERDLLDAMFDRQVDGIVLATMLTHARTIPTAATRMPTVLLNIEPDGGTDLVQVLPDEYRAGREAARLLVDTGHRRIHLIGVGDDPAHAHPFALAAAQRLRGVLDVLAEEGLRVASAQPAGQWLPPEGFRLTTALVERGEPADALLCFNDRLAMGAYQALQEAGVRVPDDVSVLSFDDTPFARWLRPGLTTFAFPQRALGRRATDELIDLIERAREDGDEAGGPGGAVHLIPLPLRTRESVAERG*