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berkeley_reactor_200306_planktonic_scaffold_4342

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Displaying items 121-150 of 178 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
berkeley_reactor_200306_planktonic_scaffold_4342_120
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(128339..129820)
DNA (1482bp) protein (494aa)
Sucrose phosphorylase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ACM4_9MICO
Sucrose phosphorylase {ECO:0000313|EMBL:EPD84410.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
alpha amylase
berkeley_reactor_200306_planktonic_scaffold_4342_121
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(129863..130834)
DNA (972bp) protein (324aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3B750_9MICO
Esterase {ECO:0000313|EMBL:KIC56430.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
esterase
berkeley_reactor_200306_planktonic_scaffold_4342_122
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(130831..131655)
DNA (825bp) protein (275aa)
Multiple sugar transport system permease n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A5N6_9MICO
Sugar ABC transporter permease {ECO:0000313|EMBL:KIC56431.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
binding-protein-dependent transport system inner membrane protein
berkeley_reactor_200306_planktonic_scaffold_4342_123
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(131655..132617)
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AQH4_9MICO
Sugar ABC transporter permease {ECO:0000313|EMBL:KIC56432.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
binding-protein-dependent transport systems inner membrane component
berkeley_reactor_200306_planktonic_scaffold_4342_124
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(132621..133988)
DNA (1368bp) protein (456aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A741_9MICO
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KIC56433.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
extracellular solute-binding protein family 1
berkeley_reactor_200306_planktonic_scaffold_4342_125
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

134124..135191
DNA (1068bp) protein (356aa)
Periplasmic binding protein/LacI transcriptional regulator n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E6Q2_9MICO
Periplasmic binding protein/LacI transcriptional regulator {ECO:0000313|EMBL:EIC07338.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
LacI family transcriptional regulator
berkeley_reactor_200306_planktonic_scaffold_4342_126
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(135202..135720)
DNA (519bp) protein (173aa)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084255};; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
Adenine phosphoribosyltransferase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E6Q0_9MICO
adenine/guanine phosphoribosyltransferase
berkeley_reactor_200306_planktonic_scaffold_4342_127
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

136195..137877
DNA (1683bp) protein (561aa)
Alpha-glucosidase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A5N1_9MICO
Alpha-glucosidase {ECO:0000313|EMBL:EPD84403.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
glycosidase
berkeley_reactor_200306_planktonic_scaffold_4342_128
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

137879..138883
DNA (1005bp) protein (335aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AQG9_9MICO
LacI family transcription regulator {ECO:0000313|EMBL:EXJ50692.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
transcriptional regulator
berkeley_reactor_200306_planktonic_scaffold_4342_129
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

139052..140275
DNA (1224bp) protein (408aa)
Amidohydrolase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E6P7_9MICO
Amidohydrolase {ECO:0000313|EMBL:KIC57877.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
metal-dependent amidase/aminoacylase/carboxypeptidase
berkeley_reactor_200306_planktonic_scaffold_4342_130
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

140272..141174
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E6P6_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC07332.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
metal-dependent phosphohydrolase
berkeley_reactor_200306_planktonic_scaffold_4342_131
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(141221..142336)
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3B743_9MICO
VanZ family protein {ECO:0000313|EMBL:KIC57879.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_4342_132
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

142409..144460
DNA (2052bp) protein (684aa)
Amino acid permease-associated region n=2 Tax=Microbacterium RepID=H8E6P4_9MICO
Amino acid permease-associated region {ECO:0000313|EMBL:EIC07330.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
amino acid transporters
berkeley_reactor_200306_planktonic_scaffold_4342_133
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

144563..145795
DNA (1233bp) protein (411aa)
Cysteine desulfurase {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216};; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
Cysteine desulfurase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A728_9MICO
sufS; selenocysteine lyase
berkeley_reactor_200306_planktonic_scaffold_4342_134
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

145797..146258
DNA (462bp) protein (154aa)
SUF system FeS assembly protein, NifU family n=2 Tax=Microbacterium RepID=H8E6P2_9MICO
SUF system FeS assembly protein, NifU family {ECO:0000313|EMBL:EIC07328.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
NifU homolog
berkeley_reactor_200306_planktonic_scaffold_4342_135
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(146366..147172)
DNA (807bp) protein (269aa)
Alpha/beta hydrolase fold containing protein n=2 Tax=Microbacterium RepID=H8E6P1_9MICO
Alpha/beta hydrolase fold containing protein {ECO:0000313|EMBL:EIC07327.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hydrolase or acyltransferase
berkeley_reactor_200306_planktonic_scaffold_4342_136
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(147212..147514)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E6P0_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EIC07326.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_4342_137
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(147511..149028)
DNA (1518bp) protein (506aa)
MATE efflux family protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AQF9_9MICO
Diguanylate cyclase {ECO:0000313|EMBL:KIC57885.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
MATE efflux family protein
berkeley_reactor_200306_planktonic_scaffold_4342_138
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

149171..150091
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E6N8_9MICO
ABC transporter {ECO:0000313|EMBL:KIC57886.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_4342_139
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(150234..152234)
DNA (2001bp) protein (667aa)
HAD hydrolase, family IA n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ACK5_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EXJ50703.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
beta-lactamase
berkeley_reactor_200306_planktonic_scaffold_4342_140
Streptomyces aurantiacus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

152394..153350
DNA (957bp) protein (319aa)
hypothetical protein n=1 Tax=Frankia sp. BCU110501 RepID=UPI00037853E4
Putative ribokinase {ECO:0000313|EMBL:EPH44513.1}; TaxID=1286094 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces aurantiacus JA 4570.;"
ribokinase
berkeley_reactor_200306_planktonic_scaffold_4342_141
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(153357..156254)
DNA (2898bp) protein (966aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3B736_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EXJ50704.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_4342_142
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(156422..157306)
DNA (885bp) protein (295aa)
LysR substrate-binding protein n=2 Tax=Microbacterium RepID=H8E6N4_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD84387.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
fkbR; FkbR1
berkeley_reactor_200306_planktonic_scaffold_4342_143
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

157371..158606
DNA (1236bp) protein (412aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A720_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD84386.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
major facilitator superfamily protein
berkeley_reactor_200306_planktonic_scaffold_4342_144
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(158637..160871)
DNA (2235bp) protein (745aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
ATPase AAA n=1 Tax=Microbacterium sp. B19 RepID=UPI00034D8390
superfamily I DNA and RNA helicase
berkeley_reactor_200306_planktonic_scaffold_4342_145
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

161016..162050
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3B732_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD84384.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
alcohol dehydrogenase GroES domain-containing protein
berkeley_reactor_200306_planktonic_scaffold_4342_146
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(162040..162714)
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A5L4_9MICO
Peptidase S51 {ECO:0000313|EMBL:EXJ50710.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
peptidase E
berkeley_reactor_200306_planktonic_scaffold_4342_147
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

162831..163262
DNA (432bp) protein (144aa)
NUDIX hydrolase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E6M9_9MICO
NUDIX hydrolase {ECO:0000313|EMBL:EIC07315.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
NTP pyrophosphohydrolase including oxidative damage repair enzyme
berkeley_reactor_200306_planktonic_scaffold_4342_148
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(163287..164807)
DNA (1521bp) protein (507aa)
Dehydrogenase with different specificities n=2 Tax=Microbacterium RepID=H8E6M8_9MICO
Short-chain dehydrogenase {ECO:0000313|EMBL:EXJ50712.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
dehydrogenase with different specificities
berkeley_reactor_200306_planktonic_scaffold_4342_149
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(164881..165555)
DNA (675bp) protein (225aa)
Lipoprotein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E6M7_9MICO
Lipoprotein {ECO:0000313|EMBL:KIC57894.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
Displaying items 121-150 of 178 in total

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