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berkeley_reactor_200306_planktonic_scaffold_4342

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Displaying items 91-120 of 178 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
berkeley_reactor_200306_planktonic_scaffold_4342_90
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(95123..96136)
DNA (1014bp) protein (338aa)
Regulatory protein LacI n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E6T4_9MICO
LacI family transcriptional regulator {ECO:0000313|EMBL:KIC58694.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
transcriptional regulator
berkeley_reactor_200306_planktonic_scaffold_4342_91
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(96139..96552)
DNA (414bp) protein (138aa)
Beta-glucosidase {ECO:0000256|RuleBase:RU361175}; EC=3.2.1.21 {ECO:0000256|RuleBase:RU361175};; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
Beta-galactosidase n=2 Tax=Microbacterium RepID=H8E6T3_9MICO
beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase
berkeley_reactor_200306_planktonic_scaffold_4342_92
Streptomyces longisporoflavus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

96624..97793
DNA (1170bp) protein (390aa)
Putative uncharacterized protein n=1 Tax=Streptomyces longisporoflavus RepID=D7F1J9_9ACTO
Putative uncharacterized protein {ECO:0000313|EMBL:ACR50752.1}; TaxID=28044 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces longisporoflavus.;"
berkeley_reactor_200306_planktonic_scaffold_4342_93
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(97679..98596)
DNA (918bp) protein (306aa)
ABC-type transporter, integral membrane subunit n=2 Tax=Microbacterium RepID=H8E6T2_9MICO
Sugar ABC transporter permease {ECO:0000313|EMBL:KIC58692.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
sugar ABC transporter permease
berkeley_reactor_200306_planktonic_scaffold_4342_94
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(98593..99657)
DNA (1065bp) protein (355aa)
ABC-type transporter, integral membrane subunit n=2 Tax=Microbacterium RepID=H8E6T1_9MICO
ABC transporter permease {ECO:0000313|EMBL:KIC58691.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
sugar ABC transporter permease
berkeley_reactor_200306_planktonic_scaffold_4342_95
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(99784..101058)
DNA (1275bp) protein (425aa)
Cellobiose transport system substrate-binding protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A771_9MICO
ABC transporter substrate-binding protein {ECO:0000313|EMBL:KIC58690.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
sugar ABC transporter periplasmic protein
berkeley_reactor_200306_planktonic_scaffold_4342_96
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

101401..101646
DNA (246bp) protein (82aa)
Phosphoribosylformylglycinamidine synthase subunit PurS {ECO:0000256|HAMAP-Rule:MF_01926}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_01926};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_01926};; Formylglycinamide ribonucleotide amidotransferase subunit III {ECO:0000256|HAMAP-Rule:MF_01926}; Phosphoribosylformylglycinamidine synthase subunit III {ECO:0000256|HAMAP-Rule:MF_01926}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
Phosphoribosylformylglycinamidine synthase, purS protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ACP3_9MICO
phosphoribosylformylglycinamidine (FGAM) synthase, PurS component
berkeley_reactor_200306_planktonic_scaffold_4342_97
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

101643..102350
DNA (708bp) protein (236aa)
Phosphoribosylformylglycinamidine synthase subunit PurQ {ECO:0000256|HAMAP-Rule:MF_00421, ECO:0000256|SAAS:SAAS00064601}; Short=FGAM synthase {ECO:0000256|HAMAP-Rule:MF_00421};; EC=6.3.5.3 {ECO:0000256|HAMAP-Rule:MF_00421, ECO:0000256|SAAS:SAAS00064588};; Formylglycinamide ribonucleotide amidotransferase subunit I {ECO:0000256|HAMAP-Rule:MF_00421}; Glutaminase PurQ {ECO:0000256|HAMAP-Rule:MF_00421}; Phosphoribosylformylglycinamidine synthase subunit I {ECO:0000256|HAMAP-Rule:MF_00421}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
Phosphoribosylformylglycinamidine synthase I n=2 Tax=Microbacterium RepID=H8E6S8_9MICO
purQ; phosphoribosylformylglycinamidine (FGAM) synthase, glutamine amidotransferase domain
berkeley_reactor_200306_planktonic_scaffold_4342_98
Microbacterium ginsengisoli, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

102433..103029
DNA (597bp) protein (199aa)
Guanine deaminase {ECO:0000313|EMBL:KJL36983.1}; EC=3.5.4.3 {ECO:0000313|EMBL:KJL36983.1};; TaxID=400772 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium ginsengisoli.;"
Cytidine and deoxycytidylate deaminase zinc-binding region n=1 Tax=Streptomyces turgidiscabies Car8 RepID=L7FDF0_9ACTO
zinc-binding CMP/dCMP deaminase
berkeley_reactor_200306_planktonic_scaffold_4342_99
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(103041..104072)
DNA (1032bp) protein (344aa)
Adenine deaminase {ECO:0000256|HAMAP-Rule:MF_01962}; Short=ADE {ECO:0000256|HAMAP-Rule:MF_01962};; EC=3.5.4.2 {ECO:0000256|HAMAP-Rule:MF_01962};; Adenine aminohydrolase {ECO:0000256|HAMAP-Rule:MF_01962}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
Adenosine deaminase n=1 Tax=Nocardia brasiliensis ATCC 700358 RepID=K0EQC3_9NOCA
adenosine deaminase
berkeley_reactor_200306_planktonic_scaffold_4342_100
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(104096..104896)
DNA (801bp) protein (267aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Arthrobacter sp. (strain FB24) RepID=A0JQW1_ARTS2
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:CDK01345.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
binding-protein-dependent transport system inner membrane protein
berkeley_reactor_200306_planktonic_scaffold_4342_101
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(104893..105729)
DNA (837bp) protein (279aa)
Nitrate/sulfonate/bicarbonate ABC transporter permease protein n=1 Tax=Microbacterium sp. TS-1 RepID=U2XN85_9MICO
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:CDK01346.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
binding-protein-dependent transport system inner membrane protein
berkeley_reactor_200306_planktonic_scaffold_4342_102
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(105719..106543)
DNA (825bp) protein (275aa)
nitrate ABC transporter ATPase n=1 Tax=Microbacterium sp. 292MF RepID=UPI000382D3E3
Uncharacterized protein {ECO:0000313|EMBL:CDK01347.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
ABC transporter
berkeley_reactor_200306_planktonic_scaffold_4342_103
Microbacterium sp. C448, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(106566..107639)
DNA (1074bp) protein (358aa)
Nitrate/sulfonate/bicarbonate ABC transporter substrate-binding protein n=1 Tax=Microbacterium sp. TS-1 RepID=U2XMS1_9MICO
NMT1/THI5 like domain protein {ECO:0000313|EMBL:CDK01348.1}; TaxID=1177594 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. C448.;"
NMT1/THI5 like domain-containing protein
berkeley_reactor_200306_planktonic_scaffold_4342_104
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(107765..108328)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E6S6_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EXJ51044.1}; Flags: Fragment;; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_4342_105
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(108325..109404)
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A765_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD84431.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
XshC-Cox1-family protein
berkeley_reactor_200306_planktonic_scaffold_4342_106
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

109551..110354
DNA (804bp) protein (268aa)
Molybdopterin dehydrogenase FAD-binding protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E6S4_9MICO
Molybdopterin dehydrogenase FAD-binding protein {ECO:0000313|EMBL:EIC07360.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs
berkeley_reactor_200306_planktonic_scaffold_4342_107
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

110351..113071
DNA (2721bp) protein (907aa)
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E6S3_9MICO
Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding protein {ECO:0000313|EMBL:EIC07359.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs
berkeley_reactor_200306_planktonic_scaffold_4342_108
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(113843..115219)
DNA (1377bp) protein (459aa)
Amidohydrolase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E6R8_9MICO
Amidohydrolase {ECO:0000313|EMBL:EIC07354.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
cytosine deaminase
berkeley_reactor_200306_planktonic_scaffold_4342_109
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

115313..115930
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E6R7_9MICO
Decarboxylase {ECO:0000313|EMBL:EXJ51035.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
LOG family protein
berkeley_reactor_200306_planktonic_scaffold_4342_110
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(116048..117340)
DNA (1293bp) protein (431aa)
N-carbamoyl-L-amino-acid hydrolase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AQJ1_9MICO
Hydantoinase {ECO:0000313|EMBL:EXJ51034.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase
berkeley_reactor_200306_planktonic_scaffold_4342_111
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(117337..118617)
DNA (1281bp) protein (427aa)
Aminotransferase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A754_9MICO
Aminotransferase V {ECO:0000313|EMBL:EXJ51033.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
serine-pyruvate aminotransferase/archaeal aspartate aminotransferase
berkeley_reactor_200306_planktonic_scaffold_4342_112
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(118614..120197)
DNA (1584bp) protein (528aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ACN2_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD84420.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit
berkeley_reactor_200306_planktonic_scaffold_4342_113
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(120556..121698)
DNA (1143bp) protein (381aa)
Acetamidase/Formamidase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E6R3_9MICO
Acetamidase {ECO:0000313|EMBL:KIC58676.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
acetamidase/formamidase
berkeley_reactor_200306_planktonic_scaffold_4342_114
Microbacterium sp. MRS-1, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(121695..123155)
DNA (1461bp) protein (487aa)
Allantoinase n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3A5P4_9MICO
Allantoicase {ECO:0000313|EMBL:EXJ51030.1}; TaxID=1451261 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. MRS-1.;"
dihydroorotase
berkeley_reactor_200306_planktonic_scaffold_4342_115
Microbacterium sp. oral taxon 186, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

123380..124024
DNA (645bp) protein (215aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3ACM8_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EPD84415.1}; TaxID=1203549 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium sp. oral taxon 186 str. F0373.;"
XRE family transcriptional regulator
berkeley_reactor_200306_planktonic_scaffold_4342_116
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

124026..124532
DNA (507bp) protein (169aa)
OHCU decarboxylase n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E6Q8_9MICO
OHCU decarboxylase {ECO:0000313|EMBL:EIC07344.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
hypothetical protein
berkeley_reactor_200306_planktonic_scaffold_4342_117
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

124529..124849
DNA (321bp) protein (107aa)
5-hydroxyisourate hydrolase {ECO:0000256|RuleBase:RU361270}; Short=HIU hydrolase {ECO:0000256|RuleBase:RU361270};; Short=HIUHase {ECO:0000256|RuleBase:RU361270};; EC=3.5.2.17 {ECO:0000256|RuleBase:RU361270};; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
5-hydroxyisourate hydrolase n=2 Tax=Microbacterium RepID=H8E6Q7_9MICO
transthyretin-like protein
berkeley_reactor_200306_planktonic_scaffold_4342_118
Microbacterium hominis, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

124947..126137
DNA (1191bp) protein (397aa)
Uncharacterized protein n=1 Tax=Microbacterium sp. oral taxon 186 str. F0373 RepID=S3AQI0_9MICO
Monooxygenase {ECO:0000313|EMBL:KIC58670.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;"
monooxygenase FAD-binding protein
berkeley_reactor_200306_planktonic_scaffold_4342_119
Microbacterium laevaniformans, Microbacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(126802..128289)
DNA (1488bp) protein (496aa)
Chromosome partitioning ATPase n=2 Tax=Microbacterium RepID=H8E6Q5_9MICO
Chromosome partitioning ATPase {ECO:0000313|EMBL:EIC07341.1}; TaxID=1160710 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium laevaniformans OR221.;"
chromosome partitioning ATPase
Displaying items 91-120 of 178 in total

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