ggKbase home page

berkeley_reactor_200306_planktonic_scaffold_44586_38

Organism: 2019_SCN_bioreactor_200211_planktonic_Micrococcales_71_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: comp(39633..40526)

Top 3 Functional Annotations

Value Algorithm Source
Flp pilus assembly protein TadB n=1 Tax=Microbacterium laevaniformans OR221 RepID=H8E633_9MICO similarity UNIREF
DB: UNIREF100
  • Identity: 67.1
  • Coverage: 295.0
  • Bit_score: 374
  • Evalue 9.60e-101
Pilus assembly protein TadB {ECO:0000313|EMBL:KIC60011.1}; TaxID=162426 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium hominis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.9
  • Coverage: 308.0
  • Bit_score: 380
  • Evalue 1.10e-102
Flp pilus assembly protein TadB similarity KEGG
DB: KEGG
  • Identity: 50.5
  • Coverage: 301.0
  • Bit_score: 257
  • Evalue 2.80e-66

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Microbacterium hominis → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 894
GTGAGCGCCCGTCGGCCCGCAGAGGCCTCCGACGCCGCGGCGACCGTCCAGAAGGTGTCGGTCCTCCTCGAATCCGGCGTCGCGCCCGGCCGGGCGTGGGAGCTGCTGGCCGAGGACGGTGATCCCGTCGCGCTGCGGGTCGCGACGGCTCCCGACGGGCCCGGCGCCTCCGCCGCGCTGCGCGCACTGGGCGGCGCGTGGGTCGATGTCGCCGCCGCGTGGCAGGTCGCGGAGACCGTCGGCGCGCCGCTCGCATCCAGCCTCCGGCGGTTCGCCGACGCGCTGCGCGGCGCCCAGGAGGCGCGCGACGACGTGCGCGTGGCGCTGGCCGACCCGACGGCCACCGCGCGTCTCGTCACGTGGCTCCCGGTCGTCGCGGTGCTCCTCGGCATGACGCTGGGCTTCGACCTCGTCGCGGCGCTCACCCAGCCGATCGGCATCGCGTGCGCGGTCGCAGGCGTCGCACTGATGCTCGCCGCACGCGGCTGGACGAAGCGCCTGGTGGCGCGCGCCCAGCCCGACGACCGCCTCGCCGGCGTGCAGGCGGAAGTCGTCGCCATCGCCCTGTCCGGGGGCGTGTCGATCGATCGGGCGCTGGCGACGGCGGAGGGTGCCGGCGCCGGACGGATCGCGCCCGACGTGCACGCGGTCCTGCGGCTGTCGCAGCGGGCCGGCGCCCCGGCCGTCGACCTCCTCCGGGCGGGTGCCGCGGAGCAACGCCGTGCCGCACGCACGGAGGGCCGGTTGCGTGCGGCCCGTCTGGGCGCGTCGCTGCTGCTGCCGATGGGCGTGTGCACCTTGCCCGCCTTCCTGCTGCTGGGCGTCGCCCCGCTGCTGCTCTCGGTGGTCGGCGGCGCATCCCTGCCGCTCGGCGCACCATCGGCACCGCCCTAG
PROTEIN sequence
Length: 298
VSARRPAEASDAAATVQKVSVLLESGVAPGRAWELLAEDGDPVALRVATAPDGPGASAALRALGGAWVDVAAAWQVAETVGAPLASSLRRFADALRGAQEARDDVRVALADPTATARLVTWLPVVAVLLGMTLGFDLVAALTQPIGIACAVAGVALMLAARGWTKRLVARAQPDDRLAGVQAEVVAIALSGGVSIDRALATAEGAGAGRIAPDVHAVLRLSQRAGAPAVDLLRAGAAEQRRAARTEGRLRAARLGASLLLPMGVCTLPAFLLLGVAPLLLSVVGGASLPLGAPSAPP*