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berkeley_reactor_200306_planktonic_scaffold_147250_222

Organism: 2019_SCN_bioreactor_200211_planktonic_Micrococcales_71_20

near complete RP 51 / 55 MC: 1 BSCG 51 / 51 ASCG 13 / 38
Location: 237374..238321

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Microbacterium sp. UCD-TDU RepID=UPI000344CD31 similarity UNIREF
DB: UNIREF100
  • Identity: 57.9
  • Coverage: 318.0
  • Bit_score: 372
  • Evalue 2.30e-100
Transcriptional activator NphR {ECO:0000313|EMBL:KJL32840.1}; TaxID=82380 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Microbacterium.;" source="Microbacterium oxydans.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.0
  • Coverage: 315.0
  • Bit_score: 374
  • Evalue 1.10e-100
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 58.5
  • Coverage: 311.0
  • Bit_score: 362
  • Evalue 1.10e-97

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Taxonomy

Microbacterium oxydans → Microbacterium → Micrococcales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 948
ATGTCAGCGAGCCCGGCGGCGCCCAGCGCCACACTCCATCGTTTCGACAGCATCGATCGGTTCCGCACCGCCGTGAACGACTCCTTCGTGCCGCTGCGGGTCGAATCGGCCCGCCCCGGCCTGCGCGCCTACATCCGCGGCTGCGCGTCCGACGGCATCCACCTCACCGAGGTGGGCGCCACCGCCCACCGCGTCGAGCGCACCGACGATCTCATCGCCCGCTCGCCGCGCGCCGCCTTCAAGGTGAGCCTCATGCTCTCGGGCACCGGCATCCTCGTGCAGGACGGCCGCCACGCCGTGCTCCGCGAGGGCGACTTCGCCATCTATGACACCAGCCGCCCCTACACGCTGAGCTTCGACGACGACTTCCGCAACCTCGTCCTCATGTTCGGGCACGACGCCGTGAGCCTGCCGCCCGAGGTCATGCGTCAGATCACCGCGACCCGCATCGCGGGAGACGGCGGCATCGGCTCGGTCGTCGCTCCGTTCCTCGCCCGCCTCGGCGGCCGCATGAGCGAGTTCGCCGGGGCGACGGGTGTGCGTCTGGCCCGCTGCGGCGTCGACCTGATCACGACGGCCGTCGTGCGCGAGCTCGGTCTGGACACCACGGCATCCGACCCGCACCGCGCCCTCCTGAACCGCATCCACCTCTACATCGACGAGAACCTCGACTCCCCCGAGCTGTCTCCGGGGACCATCGCCGCGGCGCACTACATCTCCGTGCGACACCTGCACACGCTGTTCCAGGAGTCGGGCACGACGGTGTCCGCCGTCGTGCGACAGCGCCGCCTCGAACGCTGCCGGCGCGACCTGCTCGACCCGATGCTCGCGGAGCGGCCCGTCGCGGCCGTCGGCGCGCGGTGGGGGTTCCCCGACGCGGCCCACTTCAGCCGCGCGTTCAAAGCGGCCTTCGACGTCTCCCCGAACGCCTACCGCCGCACCAACTGA
PROTEIN sequence
Length: 316
MSASPAAPSATLHRFDSIDRFRTAVNDSFVPLRVESARPGLRAYIRGCASDGIHLTEVGATAHRVERTDDLIARSPRAAFKVSLMLSGTGILVQDGRHAVLREGDFAIYDTSRPYTLSFDDDFRNLVLMFGHDAVSLPPEVMRQITATRIAGDGGIGSVVAPFLARLGGRMSEFAGATGVRLARCGVDLITTAVVRELGLDTTASDPHRALLNRIHLYIDENLDSPELSPGTIAAAHYISVRHLHTLFQESGTTVSAVVRQRRLERCRRDLLDPMLAERPVAAVGARWGFPDAAHFSRAFKAAFDVSPNAYRRTN*