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cn_combo_scaffold_14_18

Organism: CN-SCN_Pelagibacterium_44x

megabin RP 51 / 55 MC: 39 BSCG 50 / 51 MC: 37 ASCG 13 / 38 MC: 11
Location: comp(16298..16771)

Top 3 Functional Annotations

Value Algorithm Source
Transcription elongation factor GreA n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RGU5_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 76.4
  • Coverage: 157.0
  • Bit_score: 240
  • Evalue 8.80e-61
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1293439 species="Bacteri similarity UNIPROT
DB: UniProtKB
  • Identity: 92.3
  • Coverage: 156.0
  • Bit_score: 282
  • Evalue 2.80e-73
transcription elongation factor GreA similarity KEGG
DB: KEGG
  • Identity: 76.4
  • Coverage: 157.0
  • Bit_score: 240
  • Evalue 2.50e-61

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Taxonomy

Devosia epidermidihirudinis → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 474
ATGGACAAGATTCCGATGACGGTTGGGGGCCACAAGGCGCTGACCGCCGAATTCGAGCATCGGACAGCCAGTGAGCGCCGTCGCATCATCGACGCCATCTCTGAAGCCCGCGCTCACGGGGACCTGTCCGAGAACGCGGAATATCACGCCGCCAAGGAGCAGCAGAGCCTCAATGAAGGCCGCATCAAGGAGCTGGAGACCATCCTGGCCCTGGCCGACATCATCGATGTCAGCAAGCTCACTGGCCCCACCGTGAAGTTCGGTGCCACGGTGACCTTTCTCGACGAGGATACCGAGGAAGAAAAGACCTATCAGGTGGTGGGCGACCCCGAGGCCGACGCCTCGGCGGGCCGCATCTCCATCTCCTCGCCTATCGCCCGCGCCATGATCGGCAAGGAGGAAGGCGATTCGTTCGAGGTGGCCGCCCCCGGCGGCGCCCGCAGCTACGAGATCGTCACGGTGCGCTACATCTGA
PROTEIN sequence
Length: 158
MDKIPMTVGGHKALTAEFEHRTASERRRIIDAISEARAHGDLSENAEYHAAKEQQSLNEGRIKELETILALADIIDVSKLTGPTVKFGATVTFLDEDTEEEKTYQVVGDPEADASAGRISISSPIARAMIGKEEGDSFEVAAPGGARSYEIVTVRYI*