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cn_combo_scaffold_103_27

Organism: CN-SCN_Pelagibacterium_44x

megabin RP 51 / 55 MC: 39 BSCG 50 / 51 MC: 37 ASCG 13 / 38 MC: 11
Location: 22357..23061

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, GntR family n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5D1S3_VARPS similarity UNIREF
DB: UNIREF100
  • Identity: 53.3
  • Coverage: 214.0
  • Bit_score: 241
  • Evalue 7.70e-61
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 53.3
  • Coverage: 214.0
  • Bit_score: 241
  • Evalue 2.20e-61
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ACS22843.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovo similarity UNIPROT
DB: UniProtKB
  • Identity: 53.3
  • Coverage: 214.0
  • Bit_score: 241
  • Evalue 1.10e-60

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 705
ATGTATACGTTGTCGGACATGATAACGGATACTAAAGACCGCGGCAGTGAAAGCCGCTCCACGGAGACGGCCTATTCGACGATTAAGCGCCGGATTCTGGACAATGAATATGCGCCGGGCATGCAGGTGCCGGAGCAGGTTCTGGCCGACAGCCTGGGCACATCGCGTACACCGGTACGCGAGGCTCTCGTGCGTCTGGAGCAGGAGGGGTTGATCCAGCTGGTGCCGCGTCACGGCATGCGCGTGCTGTCGATTTCCGCACGTGACATGAAGGAAATTTACGAGGTCCTGATCAGCCTGGAGCCGATGGCTACGGAACTGCTGGCCACAAAGAAGCCGGATCGCAGCGAGGTCATGAGCCTCATCGAGGCCTGCGACGAAATGGAAGCGGCTCTCGACCGCGACGACCTGGAAGCCTGGGCGAAGGCAGACGAGAAATTCCATTTCCAGCTGGTTGCGCTATGCGGCAATCGCCGCTTGGCCGCCATGGTCATGGGCGTGTGGGAGCAGTCCCACAGGGCGCGGATGATCACTCTTCGCATGCGACCCAAGCCGATTGAATCGACGCGGGAGCATCGGGCGGTGGTGGAGGCGATCATTGCCGGCGACGTTGTCGGGGCTCGCGATCTTTATCGCGAGCATCGAAGCAAGGCCGCCAAGGCGATGATCGGGATTATTGAGAAGCTAGGCATGAACCATCTCTAG
PROTEIN sequence
Length: 235
MYTLSDMITDTKDRGSESRSTETAYSTIKRRILDNEYAPGMQVPEQVLADSLGTSRTPVREALVRLEQEGLIQLVPRHGMRVLSISARDMKEIYEVLISLEPMATELLATKKPDRSEVMSLIEACDEMEAALDRDDLEAWAKADEKFHFQLVALCGNRRLAAMVMGVWEQSHRARMITLRMRPKPIESTREHRAVVEAIIAGDVVGARDLYREHRSKAAKAMIGIIEKLGMNHL*