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cn_combo_scaffold_309_14

Organism: CN-SCN_Pelagibacterium_44x

megabin RP 51 / 55 MC: 39 BSCG 50 / 51 MC: 37 ASCG 13 / 38 MC: 11
Location: 10505..11044

Top 3 Functional Annotations

Value Algorithm Source
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=429727 species="Ba similarity UNIPROT
DB: UniProtKB
  • Identity: 85.5
  • Coverage: 179.0
  • Bit_score: 314
  • Evalue 1.30e-82
2'-5' RNA ligase n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4R6Y7_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 67.6
  • Coverage: 179.0
  • Bit_score: 251
  • Evalue 7.40e-64
2'-5' RNA ligase similarity KEGG
DB: KEGG
  • Identity: 67.6
  • Coverage: 179.0
  • Bit_score: 251
  • Evalue 2.10e-64

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Taxonomy

Devosia chinhatensis → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 540
ATGCCCCGGCTCTTCACCGGCCTCGAAATTCCACCCGATCTGGCCTTTGCGCTCTCGCTGAAGCGGGGCGGGCTGGCCGGCGCGCGCTGGATCGACCCGGAAAACTACCACATCACCCTGCGCTTCATCGGCGATGTCGACGGCCAGACCGCCGACGAGGTGGCGGCGAGCCTCGACCGGCTCGCCAATTCGCTGCGCTTTCCCATCAGGCTCACCCATCTGGGCACCTTTGGCGGCGACAAGCCGCGGGCCCTGTTCGCCGGCGTCGAGCCGTCCGAGGCGCTGTCGCGGCTGCAGGCGGCGCAGGAGCGGGTGCTGCAGCGGGCCGGCCTGTCGCCCGAGGGGCGCAAATTCGTGCCGCATGTGACGCTGGCCCGGCTGCGCGGCAGCGCGGCCGAGGACGTGGCGCGCTTCATCGCCGAGGCGCCGCGTTTCGAGCCGCTTTCCTTCGTGCCGGCGCGCTTCGTGCTGTTTTCCAGCCGCGATTCGGTGGGCGGCGGCCCCTATCTGGTCGAGCAATCCTATCCGCTGGCCGCCTGA
PROTEIN sequence
Length: 180
MPRLFTGLEIPPDLAFALSLKRGGLAGARWIDPENYHITLRFIGDVDGQTADEVAASLDRLANSLRFPIRLTHLGTFGGDKPRALFAGVEPSEALSRLQAAQERVLQRAGLSPEGRKFVPHVTLARLRGSAAEDVARFIAEAPRFEPLSFVPARFVLFSSRDSVGGGPYLVEQSYPLAA*