ggKbase home page

cn_combo_scaffold_620_13

Organism: CN-SCN_Pelagibacterium_44x

megabin RP 51 / 55 MC: 39 BSCG 50 / 51 MC: 37 ASCG 13 / 38 MC: 11
Location: comp(13252..15903)

Top 3 Functional Annotations

Value Algorithm Source
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=1502724 species="Bacteria; Proteobacteria; Al similarity UNIPROT
DB: UniProtKB
  • Identity: 78.8
  • Coverage: 910.0
  • Bit_score: 1308
  • Evalue 0.0
Ribonuclease E n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RAL2_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 65.7
  • Coverage: 906.0
  • Bit_score: 1037
  • Evalue 0.0
cytoplasmic axial filament protein CafA and ribonuclease G similarity KEGG
DB: KEGG
  • Identity: 65.7
  • Coverage: 906.0
  • Bit_score: 1037
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Devosia sp. LC5 → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2652
ATGGCTACCAAGAGAATGCTGGTGGATGCCATCCACCCGGAAGAAACACGGATCGTCGTCACCGCAGGTAACAGGCTCGAGGAGTTCGACTTCGAATCGGCGACCCGCCGCCAGTTGCGCGGCAATATCTATCTCGCCAAGGTCACGCGCGTAGAGCCGTCCCTGCAGGCGGCCTTCGTGGAATATGGCGGCAACCGCCACGGCTTCCTCGCCTTTTCCGAAATCCACCCCGACTACTACCAGATCCCGGTTGCCGACCGCGAAGCCCTGCTGCGCGAGGAAGAGCACCACGACGACGATCATCACGACGATGATAATGGCGAGGACACCGTGTCGCTGCCCGAGGGCGTGACCGAACCCGACGCCGAGGCCGATCCGCAGGACACCGAGGACGCCAGCCATATCGAGCAGGCCCCGGCCAATACCGAGCCGGTGGAATCGATCGGGGGCGACGACGCGCTCGAGGAAGTGCCCGAGCGCCGCCGCCAGGGCCCGAGCCGGCGCAACTACAAGATCCAGGAAGTCATCAAGCGCCGCCAGGTGATGCTGGTGCAGGTGGTCAAGGAAGAGCGCGGCAACAAGGGCGCGGCGCTGACCACCTATCTCTCGCTGGCCGGACGCTATTCGGTGCTGATGCCCAATACCGCGCGCGGCGGCGGCATTTCGCGCAAGATCACCAATGCGGCCGACCGCAAGCGCCTCAAGGAAATCACCTCCGACCTGGAGGTGCCGCAGGGCATGGGCGTCATCCTGCGCACCGCCGGGGCCAGCCGCACCAAGGCCGAGGTGAAGCGCGACTTCGAATATCTGATGCGCCTGTGGGAGAGCGTGCGCGAGCTGACGCTCAAGAGCCAGGCGCCGTGCCTGGTCTATGAGGAAGGCTCGCTGATCAAGCGCACCATCCGCGACCTCTACAACAAGGATATCGACGAAGTTCTGGTGGCGGGCGACGGCGCCTATCGCGAGGCCAAGGACTTCATGAAGATGATCATGCCGTCCCACGCCAAGAACGTGAAGCCCTATGGCGAGGACCAGCCGCTTTTCTCCAAATACAATATCGAGACCCAGCTCGACCAGATGTTCAGCCCGCAGGTGACGCTGCCCTCGGGCGGGTATCTGGTCATCAACCCCACCGAGGCGCTGGTCTCCATCGACGTCAATTCGGGCCGCTCCACCAAGGAGCACAATATCGAGGACACGGCGCTCCAGACCAATCTGGAAGCGGCCGAGGAAGTGGCGCGCCAGCTGCGCCTGCGCGACCTGGCCGGCCTCATCGTCATCGACTTCATCGACATGATGGAGAACCGCTCCAACCGGGCCGTCGAGCGTAAGCTCAAGGATTGCCTCAAGGACGACCGCGCCCGCATCCAGGTGGGCCGCATCAGCCATTTCGGCCTGATGGAAATGAGCCGCCAGCGCATCCGCTTCGGCGTGGTGGAAAGCTCCACCCACAAATGCCCGATCTGCGACGGCACGGGCCTGGTGCGCTCCACCGAGAGCCTGGCGCTGATGATCATGCGCCATATCGAGGACCATGTGCTGCGCCGTCACGGCCAGTCGATCAATGTGCGCGTGCCGGTCGAGGTGGCGCTCTATATCCTGAACTTCAAGCGCGAGACGCTGACGGCGCTTGAAGCACGCAACCAGCTCTCCATCACCATCACCGCCGATGGCAAGCTCACCGGCCAGCAATTCGCCATCGAAAAGGGCGAGGCGCGCAATTCCTCCTATGCCGAACAGCGCGCCGCCGAGCATGTGCGCGTCGATAGCGCCGTCATCGAGGACGATATCGATGAAGCCGTCGAGGAAGCCGAGGACGAAGAGCACGCCGCCAGCGAGGCCGGAGACGGCAATGGCCGCCGCCGTCGTCGCCGCCGCCGCCGTGGCGGGGCCGAACGGGGCGAGAACGGCCAGCATCAGGACGTCGCTGCGGCGTCCGGCGAAGACGAGGCGGGCGATGCCGAAACCGAGGCCGAGGATGGCGAGAGCGCCGCGCCGGCGGGAGAAGGCAATGGCGAGGACGAGCCGCGCCGCCGCCGCCGTCGTGGTCGCCGCGGTGGCCGCCGCAATCGCCGCGAGGGCGAGGAAAATGGCGAGCAGGTTGCTGCGGCCGAGCCTGAGGCCGAAGGCGAGGTGAGCGCCGCGCCGGAGGCGGTGGAAGCCGCGCCGGTCGTGGCCGAGGAGCCCCCTGCGGTTGTCGAAGCCGCGCCCGAGCCGGAAGCACCCGTGGCCGAAAAGCCCAAGCGCACCCGCCGCAAGAAGGTGACCGAGACCGAGGAATCGGCGCCGGCCGAAACCGCTCCGGTAGAGGCTGTTCCCGCCGCCGAGCCGGTGGCCGAGGAAAAGCCCAAGCGCAAGCCGCGCGCCCGCAAGCCCAAGGCCGAAACGGCCGAGACGCCCGCTACCGAAGCTGTGGCCGAGGCGGCCCCTGCTCCCGAACCGGCTGCGGAGGCTGCCGCCGTGGAGACCGAGGCGCCGGCCAAGACCACGCGTCCGCGCCGCACCAAGAAGGAGTTGCCGGCCGAGGGTATCGTGGTGTCTTCCAGCACGCCGGCCGCGGCGCCCGCCCCTGCCGAGGGTGAGGGCGAGGCGGCCGCCGAGCCGCCCAAGAAGAAGGCCGGCTGGTGGCAGCGCCGGCTTGGGCTGGGCTAG
PROTEIN sequence
Length: 884
MATKRMLVDAIHPEETRIVVTAGNRLEEFDFESATRRQLRGNIYLAKVTRVEPSLQAAFVEYGGNRHGFLAFSEIHPDYYQIPVADREALLREEEHHDDDHHDDDNGEDTVSLPEGVTEPDAEADPQDTEDASHIEQAPANTEPVESIGGDDALEEVPERRRQGPSRRNYKIQEVIKRRQVMLVQVVKEERGNKGAALTTYLSLAGRYSVLMPNTARGGGISRKITNAADRKRLKEITSDLEVPQGMGVILRTAGASRTKAEVKRDFEYLMRLWESVRELTLKSQAPCLVYEEGSLIKRTIRDLYNKDIDEVLVAGDGAYREAKDFMKMIMPSHAKNVKPYGEDQPLFSKYNIETQLDQMFSPQVTLPSGGYLVINPTEALVSIDVNSGRSTKEHNIEDTALQTNLEAAEEVARQLRLRDLAGLIVIDFIDMMENRSNRAVERKLKDCLKDDRARIQVGRISHFGLMEMSRQRIRFGVVESSTHKCPICDGTGLVRSTESLALMIMRHIEDHVLRRHGQSINVRVPVEVALYILNFKRETLTALEARNQLSITITADGKLTGQQFAIEKGEARNSSYAEQRAAEHVRVDSAVIEDDIDEAVEEAEDEEHAASEAGDGNGRRRRRRRRRGGAERGENGQHQDVAAASGEDEAGDAETEAEDGESAAPAGEGNGEDEPRRRRRRGRRGGRRNRREGEENGEQVAAAEPEAEGEVSAAPEAVEAAPVVAEEPPAVVEAAPEPEAPVAEKPKRTRRKKVTETEESAPAETAPVEAVPAAEPVAEEKPKRKPRARKPKAETAETPATEAVAEAAPAPEPAAEAAAVETEAPAKTTRPRRTKKELPAEGIVVSSSTPAAAPAPAEGEGEAAAEPPKKKAGWWQRRLGLG*