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cn_combo_scaffold_1418_26

Organism: CN-SCN_Pelagibacterium_44x

megabin RP 51 / 55 MC: 39 BSCG 50 / 51 MC: 37 ASCG 13 / 38 MC: 11
Location: comp(22313..22678)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase-binding transcription factor DksA n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4REB6_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 86.8
  • Coverage: 121.0
  • Bit_score: 215
  • Evalue 2.30e-53
RNA polymerase-binding transcription factor DksA {ECO:0000256|HAMAP-Rule:MF_00926}; TaxID=429727 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" sour similarity UNIPROT
DB: UniProtKB
  • Identity: 97.5
  • Coverage: 121.0
  • Bit_score: 239
  • Evalue 2.10e-60
C4-type zinc finger protein, DksA/TraR family similarity KEGG
DB: KEGG
  • Identity: 86.8
  • Coverage: 121.0
  • Bit_score: 215
  • Evalue 6.60e-54

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Taxonomy

Devosia chinhatensis → Devosia → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 366
ATGAACCCGCGCCAGCGGGAATATTTCCGGAACAAGCTTCTGGGCTGGAAGGACGAGATTCTGCGCGAAAGCCGCGTGACGCTCGAGAACCTCCAGGAGGAGAGCCAGAACCATCCGGACATGGCCGACCGGGCCAGTTCGGAAAGCGACCGGTCCCTGGAACTTCGCACCCGCGACCGCCAGCGCAAGCTCATCGCCAAGATCGACTCGGCGCTCAAGCGCATCGACGATGGCACCTATGGCTATTGCGAGGAAACCGGCGACCCGATCGGCATTGCCCGCCTCGATGCCCGCCCCACCGCAACGCTGAGCCTGGAAGCCCAGGAACTGCACGAGCGCCGTGAAAAGGTCTATCGCGACGAATGA
PROTEIN sequence
Length: 122
MNPRQREYFRNKLLGWKDEILRESRVTLENLQEESQNHPDMADRASSESDRSLELRTRDRQRKLIAKIDSALKRIDDGTYGYCEETGDPIGIARLDARPTATLSLEAQELHERREKVYRDE*