ggKbase home page

cn_combo_scaffold_2513_22

Organism: CN-SCN_Pelagibacterium_44x

megabin RP 51 / 55 MC: 39 BSCG 50 / 51 MC: 37 ASCG 13 / 38 MC: 11
Location: 19571..20461

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZGV9_AZOL4 similarity UNIREF
DB: UNIREF100
  • Identity: 62.5
  • Coverage: 293.0
  • Bit_score: 360
  • Evalue 1.90e-96
transcriptional regulator, LysR family similarity KEGG
DB: KEGG
  • Identity: 62.5
  • Coverage: 293.0
  • Bit_score: 360
  • Evalue 5.30e-97
Transcriptional regulator, LysR family {ECO:0000313|EMBL:CBS90557.1}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source=" similarity UNIPROT
DB: UniProtKB
  • Identity: 62.5
  • Coverage: 293.0
  • Bit_score: 360
  • Evalue 2.60e-96

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Azospirillum lipoferum → Azospirillum → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 891
ATGGCCTTCCCCTTCGAGCTGGATTTGCTGCGAACCCTTCTCGCGGTTGCCGACAACGGGGGCTTCACGCGGGCGGGTGAGCGCGTCGGCAAGACCCAGTCCACCGTCTCACTTCAGATCCAGAAGCTGGAAAAGCGGCTGGGGAAGCGTCTCTTTAAGAGGACGAGGGGGTGGCGCGGTGGCGTGCCACAGGTAACACTCGAGGGAGAAATCCTCCTCAATTACGCACGCCAAATCCTCTACCTTTGCGACGAAGCCACTTCCCGCATCCTTGAGCCCGACATCGAGGGAACGGTGCGCCTCGGCACGCCGGAGGACTTCGCGACCGTTCATCTGCCGGACATCCTGGCACGCTTTGCACGCGCCCACCCATTGGTGAACCTCGAGGTGAATTGCGACTTCACGGTCAATCTGCTCGAGGGCTTTTCCGCGGGAGAGTATGATCTCGTCCTCTTCAAGCGAGAGCCCCAATCGCATCTGCCGGCCGCAGGCGGGGGTACGGGACTTTGGAGGGAAGAGCTGGTCTGGGCTGCAAGCCCGCAACTGGTGCTCGACCCAAAACAGCCCCTTCCTTTGGTGCTCGCGCCTTCACCCGACATCTATCGAAAACGGGCTCTGGCCTCCCTAGACGCCGCCCGCCGCGACTGGCGCGTGGTCTACATGAGCCCGAGTCTCGCCGGCATTCAGGCGGCCGTGGGGGCAGGGCTTGGACTGACAGTACTTCCCAAAGGAATGGTGCCGCCGGGTTTCACCATACTGGGGTCTGAGCACGGTCTTCCCCAGCTGCCCGACACGGAAATGGTGCTCTACCGCGCACCCGGGACACTTCCAAGACCGGCTGAGCTTTTGGCCGAGCACATTGTCCACTCGCTCGAGACGGGAGCAGCTTAG
PROTEIN sequence
Length: 297
MAFPFELDLLRTLLAVADNGGFTRAGERVGKTQSTVSLQIQKLEKRLGKRLFKRTRGWRGGVPQVTLEGEILLNYARQILYLCDEATSRILEPDIEGTVRLGTPEDFATVHLPDILARFARAHPLVNLEVNCDFTVNLLEGFSAGEYDLVLFKREPQSHLPAAGGGTGLWREELVWAASPQLVLDPKQPLPLVLAPSPDIYRKRALASLDAARRDWRVVYMSPSLAGIQAAVGAGLGLTVLPKGMVPPGFTILGSEHGLPQLPDTEMVLYRAPGTLPRPAELLAEHIVHSLETGAA*