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ALT_09252017_20_scaffold_1917

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ALT_09252017_20_scaffold_1917_1
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..251)
DNA (249bp) protein (83aa)
aspartate kinase (EC:2.7.2.4)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
Aspartokinase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SK68_THIDA
ALT_09252017_20_scaffold_1917_2
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(302..1615)
DNA (1314bp) protein (438aa)
rumA; 23S rRNA (uracil-5-)-methyltransferase RumA (EC:2.1.1.-)
23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD id=1321120 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
ALT_09252017_20_scaffold_1917_3
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1688..2314)
DNA (627bp) protein (209aa)
3''''-5'''' exonuclease n=1 Tax=Thiobacillus thioparus RepID=UPI0003712DBE
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
ALT_09252017_20_scaffold_1917_4
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2391..3692)
DNA (1302bp) protein (434aa)
Predicted signal transduction protein containing EAL and modified HD-GYP domains id=1321122 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
signal transduction protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
ALT_09252017_20_scaffold_1917_5
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3789..5231
DNA (1443bp) protein (481aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003786F05
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
ALT_09252017_20_scaffold_1917_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5221..6873)
DNA (1653bp) protein (551aa)
glucose-6-phosphate isomerase (EC:5.3.1.9)
glucose-6-phosphate isomerase n=1 Tax=Thiobacillus denitrificans RepID=UPI0003768BEF
Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
ALT_09252017_20_scaffold_1917_7
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6982..7467
DNA (486bp) protein (162aa)
peptidylprolyl isomerase n=1 Tax=Thiobacillus thioparus RepID=UPI00036A19FC
FKBP-type peptidylprolyl isomerase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
ALT_09252017_20_scaffold_1917_8
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7535..8044)
DNA (510bp) protein (170aa)
sterol-binding protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036FB2AB
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
ALT_09252017_20_scaffold_1917_9
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8207..8875)
DNA (669bp) protein (223aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003775349
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ96930.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denitrificans (strain ATCC 25259).;"
ALT_09252017_20_scaffold_1917_10
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8872..9798)
DNA (927bp) protein (309aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000375A3B9
ABC-type transport system periplasmic component
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
ALT_09252017_20_scaffold_1917_11
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9795..10202)
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00037E82BA
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
ALT_09252017_20_scaffold_1917_12
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10229..11023)
DNA (795bp) protein (265aa)
ABC-type transport system permease id=12493393 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
ABC-type transport system permease
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
ALT_09252017_20_scaffold_1917_13
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11108..11644
DNA (537bp) protein (179aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003645DD9
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
ALT_09252017_20_scaffold_1917_14
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11641..12555
DNA (915bp) protein (305aa)
peptidase n=1 Tax=Thiobacillus denitrificans RepID=UPI00036A6678
TPR repeat-containing Zn-dependent protease
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
ALT_09252017_20_scaffold_1917_15
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12585..14750
DNA (2166bp) protein (722aa)
Adenylyl cyclase class-3/4/guanylyl cyclase id=1351339 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
adenylyl cyclase class-3/4/guanylyl cyclase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
ALT_09252017_20_scaffold_1917_16
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14769..15536
DNA (768bp) protein (256aa)
cAMP phosphodiesterase class-II n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SK55_THIDA
cyclic-AMP phosphodiesterase
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
ALT_09252017_20_scaffold_1917_17
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15504..15899)
DNA (396bp) protein (132aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI0003727D7B
hypothetical protein
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
ALT_09252017_20_scaffold_1917_18
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16041..17285
DNA (1245bp) protein (415aa)
aminotransferase (EC:2.6.1.-)
aminotransferase n=1 Tax=Thiobacillus thioparus RepID=UPI00037DD482
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
ALT_09252017_20_scaffold_1917_19
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17313..18245
DNA (933bp) protein (311aa)
homoserine dehydrogenase (EC:1.1.1.3)
homoserine dehydrogenase n=1 Tax=Thiobacillus thioparus RepID=UPI0003646415
Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Displaying 19 items

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