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cn_combo_scaffold_820_4

Organism: CN-SCN_Pseudonocardia_51x

partial RP 9 / 55 MC: 1 BSCG 8 / 51 MC: 1 ASCG 4 / 38
Location: 2497..2865

Top 3 Functional Annotations

Value Algorithm Source
Type IV secretory pathway VirD4 protein-like protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CK90_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 92.6
  • Coverage: 121.0
  • Bit_score: 222
  • Evalue 1.90e-55
type IV secretory pathway VirD4 protein-like protein similarity KEGG
DB: KEGG
  • Identity: 93.4
  • Coverage: 121.0
  • Bit_score: 223
  • Evalue 2.40e-56
Type IV secretory pathway VirD4 protein-like protein {ECO:0000313|EMBL:AEA22313.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonoca similarity UNIPROT
DB: UniProtKB
  • Identity: 93.4
  • Coverage: 121.0
  • Bit_score: 223
  • Evalue 1.20e-55

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 369
GTGACCGCGGGGGAGCGGGCCGCAGACATGCTCGCCGCCACCACCCGCGCCGGATCCTCAGGGGACCGGGAGTTCTGGGATGCCCAGGGCCGCCGCGTCCTCGCCGCGCTCCTGCACGCCGCCGCACTTGGCGAGAAGTCGATGCGGGATGTCCTGGGGTGGTTGTCGGATCCGGAGGCGGCGTCGCGGGAGGTGACGGTGCTGCTGCCCCGCAGCCCCGAGCCGGCGTTCGAGCTCGACCTGGGCCAGTTCCTCGGGACGAACGACCGCACCCGCTCGTCGATCACCTCGACGATCATGCCCGCCCTCGGCTGGCTCACCAGCCCGGCAGCGAGTTCAGCGGCCGGCCTCGGCGAAGAGCAGGCCTGA
PROTEIN sequence
Length: 123
VTAGERAADMLAATTRAGSSGDREFWDAQGRRVLAALLHAAALGEKSMRDVLGWLSDPEAASREVTVLLPRSPEPAFELDLGQFLGTNDRTRSSITSTIMPALGWLTSPAASSAAGLGEEQA*