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cn_combo_scaffold_2179_19

Organism: CN-SCN_Pseudonocardia_51x

partial RP 9 / 55 MC: 1 BSCG 8 / 51 MC: 1 ASCG 4 / 38
Location: 21476..22219

Top 3 Functional Annotations

Value Algorithm Source
Putative transcriptional regulator n=1 Tax=Nocardia farcinica (strain IFM 10152) RepID=Q5YXR0_NOCFA similarity UNIREF
DB: UNIREF100
  • Identity: 50.4
  • Coverage: 236.0
  • Bit_score: 223
  • Evalue 2.30e-55
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 50.4
  • Coverage: 236.0
  • Bit_score: 223
  • Evalue 6.40e-56
Putative transcriptional regulator {ECO:0000313|EMBL:BAD57031.1}; TaxID=247156 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia farcinica (strain IFM 10 similarity UNIPROT
DB: UniProtKB
  • Identity: 50.4
  • Coverage: 236.0
  • Bit_score: 223
  • Evalue 3.20e-55

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Taxonomy

Nocardia farcinica → Nocardia → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 744
GTGACGTCGGGACCGCTGGGGCGCGGCAGGCCGCCCGCGCCGATCGACGGGGCGATGCGGCTCATCGAGGCCGTCGCGCGCCTGGGCACGGGCGTGACGGCGAAGGAGCTCGCGGCGTTCGTCGGCATGCCGCCCGCGACCTGCTACCGGCTGCTGAACACGTTGACCGCCAGCGAGTTCCTGGTCCGCGTCGACGACCTGCGCGGCTTCGCCATCGGCCGCAAGATGGACGAGATCGTGACGGCGGCGGTGGCGCCGTTCGTGCCGTCGGCGGCCCGCGACGTGCTGGAGGAGCTGCGGGGTCGCATCCGGTTCGGGGTGCACCTGATCATCTACCTCGGCGACACCGTGCGGGTGGGCGACCAGGACCCCGACCGGCCGCTGCACTCCGAGCACGACCTGCTGCGTCATCCGCACGCCTCGGCAGCCGGGAAGCTGCTGCTCGCGCACCTGCCCGACTGGCGTCAGGCGCTGCCGCACCTGCGGCAGCTCACCGAGCACACGATCATCGACCCGGACGTCCTCGACGCGGAGCTCGCGGAGGTGCGCCGCACCGACACCGCGCATCAGCGGGGCGAGCTGATCGACGGGATCGCCTGCTGCGCCACGCCGATCCGCAGCCGTGGCGGCGACGTCGTGGGCGCGTTGTGCCTGGCCGGGCCGGCGGCACGGGCGTCGGTGATGACCGAGCAGATCGGGGCGACGATGGAGGCGGCGAAGCTGTTGTCGGACCTGATCAGCTGA
PROTEIN sequence
Length: 248
VTSGPLGRGRPPAPIDGAMRLIEAVARLGTGVTAKELAAFVGMPPATCYRLLNTLTASEFLVRVDDLRGFAIGRKMDEIVTAAVAPFVPSAARDVLEELRGRIRFGVHLIIYLGDTVRVGDQDPDRPLHSEHDLLRHPHASAAGKLLLAHLPDWRQALPHLRQLTEHTIIDPDVLDAELAEVRRTDTAHQRGELIDGIACCATPIRSRGGDVVGALCLAGPAARASVMTEQIGATMEAAKLLSDLIS*