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cn_combo_scaffold_4310_11

Organism: CN-SCN_Pseudonocardia_51x

partial RP 9 / 55 MC: 1 BSCG 8 / 51 MC: 1 ASCG 4 / 38
Location: 9317..9883

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase specialized sigma subunit, sigma24-like protein n=1 Tax=Rhodococcus triatomae BKS 15-14 RepID=M2WUC8_9NOCA similarity UNIREF
DB: UNIREF100
  • Identity: 55.9
  • Coverage: 177.0
  • Bit_score: 183
  • Evalue 1.50e-43
DNA-directed RNA polymerase specialized sigma subunit, sigma24-like protein {ECO:0000313|EMBL:EME15343.1}; TaxID=1278078 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus similarity UNIPROT
DB: UniProtKB
  • Identity: 55.9
  • Coverage: 177.0
  • Bit_score: 183
  • Evalue 2.10e-43
RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 54.0
  • Coverage: 174.0
  • Bit_score: 176
  • Evalue 9.00e-42

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Taxonomy

Rhodococcus triatomae → Rhodococcus → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 567
ATGGGATCACCCCTCCATCCGGAGGACACCGGGCCGGGCGACGCGGGACGCGCCGCCGAGCTGGGACTGGTGCGCCGCGCCGGCGCGGGCGACACCCGCGCGTTCGCGACGCTCGTCGACGCCCACCGCGACCGCGCCTGGGCGGTCTGCCTGCGCATCACCGGTCATCAGTACGACGCCGAGGACGCCCTGCAGGACGCGCTCACCGCGGCCTGGCGTCACCTGCCGACGTTCCGCGGCGACGCCCGCTTCGGGACGTGGCTGCACCGCATCGCGGCCAACGCCGCGCTCAAGCTGGTGACCCGTCGCCGGGAGGCGCCCGTCGACGAGGCGCCCGATGTCGTCGACGCCGGGTCGGACTTCGCGCTGGGGATCGTCGAGCGTGACGCCCTCGACGCCGCGCTCGCGCTCCTCCCGCCGGACTTCCGCGTGGCGCTGGTGCTGCGCGAGTACGCGGACATGTCGTACGCGGAGATCGCCGAGGCGCAGGGCGTCGGGATCCAGACCGTGAAGAGCAGGCTGAACCGGGCCCGCCGCGCCGTACAGACGCTGCTGCAGGACACATGA
PROTEIN sequence
Length: 189
MGSPLHPEDTGPGDAGRAAELGLVRRAGAGDTRAFATLVDAHRDRAWAVCLRITGHQYDAEDALQDALTAAWRHLPTFRGDARFGTWLHRIAANAALKLVTRRREAPVDEAPDVVDAGSDFALGIVERDALDAALALLPPDFRVALVLREYADMSYAEIAEAQGVGIQTVKSRLNRARRAVQTLLQDT*