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cn_combo_scaffold_5491_14

Organism: CN-SCN_Pseudonocardia_51x

partial RP 9 / 55 MC: 1 BSCG 8 / 51 MC: 1 ASCG 4 / 38
Location: comp(12073..13542)

Top 3 Functional Annotations

Value Algorithm Source
Type III effector Hrp-dependent outers domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CJS5_PSEUX similarity UNIREF
DB: UNIREF100
  • Identity: 86.9
  • Coverage: 489.0
  • Bit_score: 824
  • Evalue 5.80e-236
Hrp-dependent type III effector-domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 86.7
  • Coverage: 489.0
  • Bit_score: 822
  • Evalue 4.80e-236
Type III effector Hrp-dependent outers domain protein {ECO:0000313|EMBL:AEA25935.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonoc similarity UNIPROT
DB: UniProtKB
  • Identity: 86.7
  • Coverage: 489.0
  • Bit_score: 822
  • Evalue 2.40e-235

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Taxonomy

Pseudonocardia dioxanivorans → Pseudonocardia → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1470
GTGACCCCACTTCCCGCCGTCACGGGGCCCGTCGACCCCGACGAGCTCGTCCGCGGGTTCCCGCCGCCCTGGCAGGTCGACGCCCGCGACCTCGCCCGCCGGGTCGCGGCCGGGCGGCGCGTCGTCGTGCTCGACGACGACCCCACCGGCACCCAGTCCGTCGCCGACGTCCCCGTCCTCACCGCGTGGGGGCCCGACGACCTCGCGTGGGCCTTCGCCCAGGACACCCCCGGGTTCTTCGTGCTCACCAACACCCGCAGCCTCGCCGAGGCCGACGCCGTCGCATTGGGGGAGGAGGTCGCGGCCGCGGTCGCGCGGGCCGCCGCCGCGGCGGGTGTCGACCACATGCTGGTGTCGCGCAGCGACTCCACGCTGCGCGGCCACTTCCCGGCCGAGACCGACGTCCTCGTCCGTGCCGCCGCCGACGCCGGGGCGCCCGTCGACGGCGTCGTGATCGTCCCGGCGATGATCGAGCCGGGCAGGCTCACCGTCGGCTCGGTGCACTGGATGCGCACCGCCGACGGGATGATCCCGGTGTCGCACAGCGAGTTCGCCCGCGACGCCACCTTCGGTTACACCAACGCCGACCTGCGCGACTGGGTCGCCGAGAAGACCGGCGGCAGGGTCGGGCGCGGCGCGGTCGCGACCGTCACGCTCACCGACCTGCGTGGCGGCGGCCCCACCCGGGTCGCCGAGATCCTCGGCGGTCTCACCGACGCCCAGCCGGTCGTGGTCGACGCCGCCACCGACGACGACCTGCGCGTCCTCGTCGAAGGTCTGCTCGCAGCCGAGGCCGCGGGTAAGAGGTTCGTGCACCGGTCGGGGCCGTCGTTCGTCCGGGCCCGGCTCGGGCAGACCGCCCGCCTGCCGCTCGCGGCCGGCGACCTGCACCCGGGCACGACCGGCCCGGCCGACGTCCGCACGCCCGTTCCGCGCGGCCTCGTCGTCGTCGGCTCGCACGTCGGCCTGACCACACGGCAGCTCGACCGGCTGCGCGCCGCGGGCGGCATCACCGAGGCCGAGCTCGACGTCCCGACCCTGCTCGACCCGGCCCGCCGCGTGGAACACGTCCGGGCCGTGGCGGCCGAGGTGGCCGACCTGCTCGGCGGCGACGCCGACGTCGTGCTGCGCACCAGCCGCACCCTCGTCACCGGCGCGGACGCCGACGAGAGCCTCGCGATCGCGCGGACCGTCAGCGCGTCGACGGTCGACGTCGTCGCGGAGGTCGTCGCCCGGGTGCGGCCGCGGTTCGTCGTCGCCAAGGGCGGGATCACGTCGTCCGACACCGCGACGGGCGCGCTCGGGATCGCCCGGGCCTGGGCCCGGGGCACGCTGCTGCCGGGGATCGTCTCGGTGTGGGAGCCGGTCGCCGGACCCGCCCGCGGCATCCCGTACGTGGTGTTCGCGGGCAACGTCGGCGACGACGCCGGGCTCGTCGACGCCGTCTCGGTCCTGAGGGGGATCCGATGA
PROTEIN sequence
Length: 490
VTPLPAVTGPVDPDELVRGFPPPWQVDARDLARRVAAGRRVVVLDDDPTGTQSVADVPVLTAWGPDDLAWAFAQDTPGFFVLTNTRSLAEADAVALGEEVAAAVARAAAAAGVDHMLVSRSDSTLRGHFPAETDVLVRAAADAGAPVDGVVIVPAMIEPGRLTVGSVHWMRTADGMIPVSHSEFARDATFGYTNADLRDWVAEKTGGRVGRGAVATVTLTDLRGGGPTRVAEILGGLTDAQPVVVDAATDDDLRVLVEGLLAAEAAGKRFVHRSGPSFVRARLGQTARLPLAAGDLHPGTTGPADVRTPVPRGLVVVGSHVGLTTRQLDRLRAAGGITEAELDVPTLLDPARRVEHVRAVAAEVADLLGGDADVVLRTSRTLVTGADADESLAIARTVSASTVDVVAEVVARVRPRFVVAKGGITSSDTATGALGIARAWARGTLLPGIVSVWEPVAGPARGIPYVVFAGNVGDDAGLVDAVSVLRGIR*