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cn_combo_scaffold_9284_8

Organism: CN-SCN_Pseudonocardia_51x

partial RP 9 / 55 MC: 1 BSCG 8 / 51 MC: 1 ASCG 4 / 38
Location: 5204..6079

Top 3 Functional Annotations

Value Algorithm Source
Sigma factor, sigma 70 type, group 4 (ECF) n=1 Tax=Streptomyces gancidicus BKS 13-15 RepID=M3BYB2_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 83.7
  • Coverage: 289.0
  • Bit_score: 475
  • Evalue 3.00e-131
Sigma factor, sigma 70 type, group 4 (ECF) {ECO:0000313|EMBL:EMF29054.1}; TaxID=1284664 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces gan similarity UNIPROT
DB: UniProtKB
  • Identity: 83.7
  • Coverage: 289.0
  • Bit_score: 475
  • Evalue 4.20e-131
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 82.8
  • Coverage: 290.0
  • Bit_score: 472
  • Evalue 9.40e-131

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Taxonomy

Streptomyces gancidicus → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 876
GTGACCGCCACCGCGTCGTTCGTCGCCCATCGCAACCTGCTCTTCACCGTCGCCTACGAGATGCTCGGCTCCGCCGCCGACGCGGAGGACGTCCTGCAGGAGACCTGGCTGCGCTGGGCCACCGTCGACCTCGCCGACATCCGCGACCACCGCGCCTACCTGGTGCGCATCACCACCCGCCAGGCCCTGACCCGGCTGCGGACCCTCGGCAGGCGCAAGGAGTCCTACGTCGGGTCATGGCTGCCCGAACCCCTGCTCACCACCCCCGACGTCGCCGACGACGTCGAGCTCGCCGACAGCGTCTCGATGGCGATGCTGCTGGTCCTGGAGACCCTCGCGCCCCTCGAACGTGCTGTCTTCGTGCTGCGCGACGTGTTCGACGTGGGCTACGACGAGATCGCCGAGGCCGTCGACAAGACCCCCGCGACCGTCCGGCAGATCGCCCACCGCGCCCGCGCGCACGTCGCCGCCCGCAGGCCTCGCGGCGTCGTCACCCAGGACGAGAGCCGCGGTGCCCTCGACGCCTTCCGCCGCGCCGTCGAGACCGGCGACCTGCAGGGACTGCTCGACGTCCTCGCCCCCGACGTCGTCCTCCTCGGCGACGGCGGCGGCATCAAGCAGGCGGTGCTGCGGCCCGTCGTCGGTGCCGACAAGGTCGGCCGGCTGCTCACCACCGGCTGGACCCGCGTCCCCGGGGAGGTCACCCTGGAACCGGTTCTGGTCAACGGCTACCCCGCGCTGGTGCTGCGTATCGACGGAGAGCTCGACAGCGTCGTCGCCCTGCGCATCGACGACGGCCGCGTCACCGGCCTCTACGCCGTCCGCAACCCGCAGAAGCTCTCGCACATGGACCGCGAGACCGCCCTGCGCCGCTGA
PROTEIN sequence
Length: 292
VTATASFVAHRNLLFTVAYEMLGSAADAEDVLQETWLRWATVDLADIRDHRAYLVRITTRQALTRLRTLGRRKESYVGSWLPEPLLTTPDVADDVELADSVSMAMLLVLETLAPLERAVFVLRDVFDVGYDEIAEAVDKTPATVRQIAHRARAHVAARRPRGVVTQDESRGALDAFRRAVETGDLQGLLDVLAPDVVLLGDGGGIKQAVLRPVVGADKVGRLLTTGWTRVPGEVTLEPVLVNGYPALVLRIDGELDSVVALRIDDGRVTGLYAVRNPQKLSHMDRETALRR*