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cn_combo_scaffold_418_18

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: 18146..19285

Top 3 Functional Annotations

Value Algorithm Source
L-carnitine dehydratase/bile acid-inducible protein F n=1 Tax=Frankia sp. (strain EuI1c) RepID=E3J930_FRASU similarity UNIREF
DB: UNIREF100
  • Identity: 37.1
  • Coverage: 399.0
  • Bit_score: 213
  • Evalue 3.60e-52
L-carnitine dehydratase/bile acid-inducible protein F similarity KEGG
DB: KEGG
  • Identity: 37.1
  • Coverage: 399.0
  • Bit_score: 213
  • Evalue 1.00e-52
L-carnitine dehydratase/bile acid-inducible protein F {ECO:0000313|EMBL:ADP80909.1}; TaxID=298654 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. (strain EuI similarity UNIPROT
DB: UniProtKB
  • Identity: 37.1
  • Coverage: 399.0
  • Bit_score: 213
  • Evalue 5.10e-52

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Taxonomy

Frankia sp. EuI1c → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1140
ATGGGTGACTCGGTGACTACGCCCGATCCTCTCGTCGAGGTCGGCTGGCTGGCCGGGACGACTGTCCTCGAGGTCACGACCGGGGTGGCGGGTCCGCTGGTCGGCAGGATCCTCGGGGAGCTCGGCGCGGACGTCGTGAAGGTGGAGTCGCGCGGCAAACCGGACGTCAACCGGGCCCGGGTGGCTCGTCCAGGGGATCCTGCCGGATTCCCGGCACACGAGGCCTTCCAACTTCTGCACGAGGCGAACGCCGGCAAACGCAGCATCACCATCGACCTCAAGACCGAGGAGGGGCGCGAACTGTTCGACCGGTTGCTCGGCGCCGCCGACGTCTTCGTCGAGAACTTCGCGCCGGGCTGGCTCGACCGGCTGGGCATGCCGATCCGGGTCCTACGCGAACGGCATCCCTCGCTGGTCGTTCTGTCCGCCAGCGGGTACGGGCAGACCGGTCCGATGCGCAGCCAGCGCGCCTATGCGCCGGTGATGACCGCGCTGGCCGGGGTCGAAGGTCTGATCGGATACGGCGACGACGACGTGACGGGCGCGATGGCGCTCGCCCTGGCCGATCTCAACTGCTCCTACTACGGCGCATGTCTCGTCATGGCTGCCCTGGCAGGACGGGCGGCCACAGGGCTCGGCCAGCACATCGACCTCTCCCAGACCGAGGCCGCAGCGGCACTGGTCGGCGAGGCGTTCGTCGAACAGCAGCTCGGCACCGCTCCCGGCCCACGCGGCAACACCGGCCCGAACGGAGAGTCCTGGCACGTCGTCTCGACCGGTGCGGACGAGTGGGTCGCGGTTGCGGGCAGCCCCTACAGACCGCCATCCGTTGCGGGCGGACGACCTGCCGCCGCCGACCGTCTAGGCCGGGACGGGACGGAGGCAGCAGCCGTACTGACGCCAGCCGAGGTCGCGAGCTCCGCGGACCTGTGGACACGGGGGCTCTTCCAGACGGTCCCTCACCCGCTCCTGGAGGAGGTCACTGTCACGGGCCTGCCCTGGCACGTGGACGGCGCCGCGATCCGCGTGCGCGCCGCCGCCCCGCAGCTCGGGGCCCACACGAGCGAGGTGCTGGAGGAGCGGCTCGGTCTCACCCCAGCCGAGATCAGCAGTCTCGACCGCGCCGGGGTGCTGCGGTGA
PROTEIN sequence
Length: 380
MGDSVTTPDPLVEVGWLAGTTVLEVTTGVAGPLVGRILGELGADVVKVESRGKPDVNRARVARPGDPAGFPAHEAFQLLHEANAGKRSITIDLKTEEGRELFDRLLGAADVFVENFAPGWLDRLGMPIRVLRERHPSLVVLSASGYGQTGPMRSQRAYAPVMTALAGVEGLIGYGDDDVTGAMALALADLNCSYYGACLVMAALAGRAATGLGQHIDLSQTEAAAALVGEAFVEQQLGTAPGPRGNTGPNGESWHVVSTGADEWVAVAGSPYRPPSVAGGRPAAADRLGRDGTEAAAVLTPAEVASSADLWTRGLFQTVPHPLLEEVTVTGLPWHVDGAAIRVRAAAPQLGAHTSEVLEERLGLTPAEISSLDRAGVLR*