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cn_combo_scaffold_987_2

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: comp(556..1275)

Top 3 Functional Annotations

Value Algorithm Source
Putative GntR family transcriptional regulator n=1 Tax=Rhodococcus opacus (strain B4) RepID=C1B7B0_RHOOB similarity UNIREF
DB: UNIREF100
  • Identity: 56.6
  • Coverage: 235.0
  • Bit_score: 250
  • Evalue 2.20e-63
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 56.6
  • Coverage: 235.0
  • Bit_score: 250
  • Evalue 6.20e-64
Putative GntR family transcriptional regulator {ECO:0000313|EMBL:BAH51563.1}; TaxID=632772 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus similarity UNIPROT
DB: UniProtKB
  • Identity: 56.6
  • Coverage: 235.0
  • Bit_score: 250
  • Evalue 3.10e-63

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Taxonomy

Rhodococcus opacus → Rhodococcus → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 720
TTGTCGCTCGAGAACCGTCGCGGGATACATCCCGTAGCCGAACGAAAGGCCTCGGCCGTCGATCTCGTGCTGCACGAGATCCGGCGCTCCATCTTGAACGGGGCCCTCCCCCCGGGCCGCCCTTTCACCGTCTCAGCGCTGACCGACCAGCTCGGCGTCAGCCACATCCCCGTGCGTGAGGCGCTGCGCCATCTCGAGGCCCAGGGCCTCGTCGTCCTGAGCCCCTCGCGCAGCGCGATCGTCACGCCGCTCGACTCTGAGGACCTGCGCGCGATCTTCCGGCTGCGCATAACCGTCGAGCCCGAGCTCGCGGCGTTGTCGGCCCCGCACCGCACCGACGCGGACATCGACGAGCTCGCCCGCCTCGTCCGCGCTACCTTCGAGAGGATCCCGGCGAAGGAATTCTGGGGCCCGCGCCGGGACTTCTACCTGGCGCTCATCCGCCCAGCGGCCAGCGAGTGGGACCTCCGTCTGCTGCGCCCGCTCTGGCAGGCGTCCGAGCGCTACACCCGGCTCGTATTTGACCCCGGCGGTGAGACCGAGAACTTCACCGACTGGCGCAGTCACGTCTCCTTCGAGCTGATCCAGGCCGCGCGCTCCCGCGACCCGGAGCGCATGCGAGCCGAGGTGCGCCAACAACTCGAGGCCAACCAACAGACGTTGTTGGAGGGGCTCAGCTGCTCCGAGGGCGGCTGGTCCACGGAGGACGAGACCGCCTAG
PROTEIN sequence
Length: 240
LSLENRRGIHPVAERKASAVDLVLHEIRRSILNGALPPGRPFTVSALTDQLGVSHIPVREALRHLEAQGLVVLSPSRSAIVTPLDSEDLRAIFRLRITVEPELAALSAPHRTDADIDELARLVRATFERIPAKEFWGPRRDFYLALIRPAASEWDLRLLRPLWQASERYTRLVFDPGGETENFTDWRSHVSFELIQAARSRDPERMRAEVRQQLEANQQTLLEGLSCSEGGWSTEDETA*