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cn_combo_scaffold_987_15

Organism: CN-SCN_Pseudonocardia_86x

partial RP 15 / 55 MC: 1 BSCG 14 / 51 MC: 2 ASCG 7 / 38 MC: 1
Location: 14029..14829

Top 3 Functional Annotations

Value Algorithm Source
Protocatechuate 3,4-dioxygenase, beta subunit n=1 Tax=Mycobacterium vanbaalenii (strain DSM 7251 / PYR-1) RepID=A1T2K2_MYCVP similarity UNIREF
DB: UNIREF100
  • Identity: 70.5
  • Coverage: 261.0
  • Bit_score: 400
  • Evalue 1.10e-108
Protocatechuate 3,4-dioxygenase {ECO:0000313|EMBL:KGI65902.1}; TaxID=318424 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium rufum.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 73.4
  • Coverage: 248.0
  • Bit_score: 406
  • Evalue 2.90e-110
protocatechuate 3,4-dioxygenase subunit beta similarity KEGG
DB: KEGG
  • Identity: 72.2
  • Coverage: 252.0
  • Bit_score: 399
  • Evalue 5.40e-109

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Notes

benzoate degradation Rose Kantor (9/22/14)

Taxonomy

Mycobacterium rufum → Mycobacterium → Corynebacteriales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 801
GTGACCGAGATTGTGAAGGAGACGCTCGACCCGACCACAGGGTTGGCGACACAAGAGTCGATCTCGGCGGAGATCTCTCGCTTCGCCCGCGACTGTGAGCGGGCAGGGCGAGACGAGGCGCAGCCGCGGCTCGGCTACGCCCCGTACCGCGGCAGCCTCCTGCGCCACCCCACCAAGGATCCTGTCCAGGTCGATCCGGAAGGTGTCGAGCTGTGGGCTCCCTGCTTCGGGGTGCGCGATGTCGACCCTCTTGAGGCCGATCTGACGATTCAGCGGGCCGGCGACCCGATTGGTGAACGGATGGTCATGGCGGGCCGGGTCGTCGATGGGGATGGTCGTCCGGTGCGCCGCCAGCTCGTGGAGATCTGGCAGGCGAACGCGGCGGGACGCTATGTCCATCAGCGGGACCAGCATCCGGCGCCGCTCGACCCACATTTTGTCGGGGCGGGTCGATGCATGACCGATGACGAGGGCTGGTACCGCTTCGTCACCATCAAGCCCGGCCCGTACCCATGGCGCAACCACCACAATGCGTGGCGGCCCGCGCACATCCACTTCTCCTTGTTCGGCACGGACTTCACCCAGCGGCTCATCACCCAGATGTACTTCCCGAACGATCCGCTGCTCCCACTCGACCCGATCTGCCAGTCGATCCCTGACGCGAAGGTGCGCAACCGCCTTGTGGCTGATTACGACCACGGCCTGACCAGCCACGAGTGGGCGACCGGATACCGGTGGGACGTAGTGCTCACCGGCTCTCACCGCACCCCGCTGAACCTCGACGTCGAGGAGCGCCAGTGA
PROTEIN sequence
Length: 267
VTEIVKETLDPTTGLATQESISAEISRFARDCERAGRDEAQPRLGYAPYRGSLLRHPTKDPVQVDPEGVELWAPCFGVRDVDPLEADLTIQRAGDPIGERMVMAGRVVDGDGRPVRRQLVEIWQANAAGRYVHQRDQHPAPLDPHFVGAGRCMTDDEGWYRFVTIKPGPYPWRNHHNAWRPAHIHFSLFGTDFTQRLITQMYFPNDPLLPLDPICQSIPDAKVRNRLVADYDHGLTSHEWATGYRWDVVLTGSHRTPLNLDVEERQ*